RNA id: TU283098


Basic Information

Item Value
RNA id TU283098
length 828
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G208917
representative True

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 1548773 ~ 1550127 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gctacacaactgacctgagatcaggcagtacatttacatactacacaactgacctgagatcaggtagaacatttacataggctacacaactgacctgagatcaggcagtacatttacataggctacacaactgacctgagatcaggcagtacatttacatactacacaactgacctgagatcaggtagtacatttacataggctacacaactgacctgagatcaggcagtacatttacataggctacacaactgacctgagatcaggcagtacatttacataggctacacaactgacctgagatcaggcagtacatttacatactacacaactgacctgagatcaggcagtacatttacataggctacacaactgacctgagatcaggtagaacatttacataggctacacaactgacctgagatcaggtagaacatttacataggctacacaactgacctgagatcaggtgggaacatttacataggctacacaactgacctgagatcaggcagtacatttacataggctacacaactgacctgagatcaggcagtacatttacataggctacacaactgacctgagatcaggcagtacatttacatactacacaactgacctgagatcaggcagtacatttacataggctacacaactgacctgagatcaggcagtacatttacatactacacaactgacctgagatcaggcagtacatttacataggctacacaactgacctgagatcaggcagtacatttacataggctacacaactgacctgagatcaggcagtacatttacatactacacaactgacctgag

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
XR_005637781.1 lncRNA upstream 18954 1507341 ~ 1529819 (+) True LOC120550773
TU283094 lncRNA upstream 56742 1491690 ~ 1492031 (+) True G208914
TU282871 lncRNA upstream 115621 1430509 ~ 1433152 (+) True G208777
TU283070 lncRNA upstream 158878 1356116 ~ 1389895 (+) True G208891
TU283069 lncRNA upstream 185082 1346805 ~ 1363691 (+) True G208890
XR_005637780.1 lncRNA downstream 26002 1576129 ~ 1577338 (+) False LOC120550772
TU283092 lncRNA downstream 26786 1576913 ~ 1634480 (+) True G208912
TU283089 lncRNA downstream 58346 1608473 ~ 1611648 (+) True G208909
TU283093 lncRNA downstream 60341 1610468 ~ 1612948 (+) True G208913
TU283088 lncRNA downstream 70607 1620734 ~ 1638458 (+) True G208908
XM_039788851.1 mRNA upstream 51106 1490162 ~ 1497667 (+) True LOC120551417
XM_039788841.1 mRNA upstream 84166 1461274 ~ 1464607 (+) True LOC120551412
XM_039788839.1 mRNA upstream 111188 1430472 ~ 1437585 (+) True LOC120551410
XM_039788840.1 mRNA upstream 111188 1430472 ~ 1437585 (+) False LOC120551410
XM_039788829.1 mRNA upstream 121712 1413788 ~ 1427061 (+) True LOC120551406
XM_039787607.1 mRNA downstream 3730 1553857 ~ 1592744 (+) True LOC120550771
XM_039787608.1 mRNA downstream 44354 1594481 ~ 1616080 (+) True LOC120550774
XM_039787611.1 mRNA downstream 44354 1594481 ~ 1616080 (+) False LOC120550774
XM_039787613.1 mRNA downstream 44354 1594481 ~ 1616080 (+) False LOC120550774
XM_039787610.1 mRNA downstream 44354 1594481 ~ 1616080 (+) False LOC120550774
TU282870 other upstream 55592 1430509 ~ 1493181 (+) False G208777
TU283035 other upstream 343525 1204590 ~ 1205248 (+) True G208867
TU283000 other upstream 455176 1090547 ~ 1093597 (+) True G208852
TU282997 other upstream 489333 1058842 ~ 1059440 (+) True G208851
TU282854 other upstream 893553 654899 ~ 655220 (+) True G208768
XR_005637782.1 other downstream 44354 1594481 ~ 1613738 (+) False LOC120550774
TU283626 other downstream 782051 2332178 ~ 2334285 (+) True G209284
TU283630 other downstream 794154 2344281 ~ 2360302 (+) False LOC120551576
TU283706 other downstream 1165518 2715645 ~ 2797135 (+) True G209344
TU283708 other downstream 1229614 2779741 ~ 2833674 (+) False G209344

Expression Profile