RNA id: TU283713


Basic Information

Item Value
RNA id TU283713
length 458
lncRNA type inter_gene
GC content 0.47
exon number 3
gene id G209344
representative False

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 2671275 ~ 2833674 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgtgtgtgtgtgtgtgtgtgtgtctttgtgtctctgtgtgtgtgtctgtgtgtgtgtctctgtgtgtgtgtgtgtctctgtgtatgtgtgtctctgtgtatttgtgtgtctttgtgtctctgtgtgtgtgtctgtgtgtgtgtgtctctgtgtatgtgtgtctctgtgtatttgtgtctctgtgtttgtgtgtctttgtgtctctgtgtgtgtgtctgtgtgtgtgtgtctctgtgtatgtgtgtctctgtgtatttgtgtgtctctgtgtgtctttgtgtctctgtgtgtgtgtctgtttgtgtctctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtttgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU283705 lncRNA upstream 682 2680675 ~ 2680983 (+) True G209343
TU283704 lncRNA upstream 12508 2668751 ~ 2669157 (+) True G209342
TU283678 lncRNA upstream 77213 2602965 ~ 2604452 (+) True G209321
TU283661 lncRNA upstream 109486 2568522 ~ 2572179 (+) True G209313
TU283649 lncRNA upstream 181888 2495779 ~ 2499777 (+) True G209301
TU283715 lncRNA downstream 1236 2831287 ~ 2833674 (+) False G209344
TU283758 lncRNA downstream 78003 2908054 ~ 2908516 (+) True G209372
TU283761 lncRNA downstream 93934 2923985 ~ 2924270 (+) True G209374
TU283762 lncRNA downstream 113345 2943396 ~ 3010412 (+) True G209375
TU283771 lncRNA downstream 280648 3110699 ~ 3201134 (+) True G209382
XM_039788750.1 mRNA upstream 148202 2526662 ~ 2533463 (+) True LOC120551356
XM_039789064.1 mRNA upstream 319306 2344346 ~ 2362359 (+) True LOC120551576
XM_039788394.1 mRNA upstream 369216 2302291 ~ 2312449 (+) True LOC120551177
XM_039789062.1 mRNA upstream 382861 2277900 ~ 2298804 (+) True LOC120551574
XM_039789061.1 mRNA upstream 675120 1992977 ~ 2006545 (+) True LOC120551573
XM_039789069.1 mRNA downstream 757028 3587079 ~ 3621179 (+) True LOC120551583
XM_039789071.1 mRNA downstream 840539 3670590 ~ 3687777 (+) True LOC120551587
XM_039787170.1 mRNA downstream 999264 3829315 ~ 3832201 (+) True LOC120550572
XM_039789000.1 mRNA downstream 1112330 3942381 ~ 3943422 (+) True atoh1c
XM_039788724.1 mRNA downstream 1168322 3998373 ~ 4028282 (+) False LOC120551345
TU283630 other upstream 321363 2344281 ~ 2360302 (+) False LOC120551576
TU283626 other upstream 347380 2332178 ~ 2334285 (+) True G209284
XR_005637782.1 other upstream 1067927 1594481 ~ 1613738 (+) False LOC120550774
TU283086 other upstream 1104295 1498447 ~ 1577370 (+) True LOC120550772
TU283091 other upstream 1109828 1466018 ~ 1571837 (+) True G208911
TU283964 other downstream 815958 3646009 ~ 3646997 (+) True G209514
TU283994 other downstream 988802 3818853 ~ 3823251 (+) True LOC120550571
TU283997 other downstream 991848 3821899 ~ 3823251 (+) False LOC120550571
XR_005637866.1 other downstream 1168322 3998373 ~ 4027498 (+) False LOC120551345
XR_005637777.1 other downstream 2761285 5591336 ~ 5687896 (+) False LOC120550763

Expression Profile