RNA id: TU283714


Basic Information

Item Value
RNA id TU283714
length 481
lncRNA type inter_gene
GC content 0.50
exon number 4
gene id G209344
representative False

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 2671275 ~ 2833674 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtgtgtgtctgtctgtgtgtgtgtctctgtgtgtgtgtctgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtatgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtctctgtctgtgtgtctgtgtgtgtctctgtctgtgtgtctgtgtgtgtctatgtgtgtgtgtgtgtgtgtgtctctgtctgtgtgtgtgtctctatctgtgtgtgtgtgtgcctgtgtgtgtgtgtgtgtgtctctatctgtgtgtgtgcgtgcctgtgtgtgtgtgtctctgtctctgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtctctatctgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU283709 lncRNA upstream 37098 2715645 ~ 2716623 (+) False G209344
TU283677 lncRNA upstream 44945 2700450 ~ 2708776 (+) True G209320
TU283669 lncRNA upstream 63625 2601842 ~ 2690096 (+) True G209316
TU283711 lncRNA downstream 52 2797187 ~ 2830051 (+) False G209344
TU283747 lncRNA downstream 19292 2816427 ~ 2816748 (+) True G209363
TU283715 lncRNA downstream 34152 2831287 ~ 2833674 (+) False G209344
TU283758 lncRNA downstream 110919 2908054 ~ 2908516 (+) True G209372
TU283761 lncRNA downstream 126850 2923985 ~ 2924270 (+) True G209374
XM_039788750.1 mRNA upstream 220258 2526662 ~ 2533463 (+) True LOC120551356
XM_039789064.1 mRNA upstream 391362 2344346 ~ 2362359 (+) True LOC120551576
XM_039788394.1 mRNA upstream 441272 2302291 ~ 2312449 (+) True LOC120551177
XM_039789062.1 mRNA upstream 454917 2277900 ~ 2298804 (+) True LOC120551574
XM_039789061.1 mRNA upstream 747176 1992977 ~ 2006545 (+) True LOC120551573
XM_039789069.1 mRNA downstream 789944 3587079 ~ 3621179 (+) True LOC120551583
XM_039789071.1 mRNA downstream 873455 3670590 ~ 3687777 (+) True LOC120551587
XM_039787170.1 mRNA downstream 1032180 3829315 ~ 3832201 (+) True LOC120550572
XM_039789000.1 mRNA downstream 1145246 3942381 ~ 3943422 (+) True atoh1c
XM_039788724.1 mRNA downstream 1201238 3998373 ~ 4028282 (+) False LOC120551345
TU283630 other upstream 393419 2344281 ~ 2360302 (+) False LOC120551576
TU283626 other upstream 419436 2332178 ~ 2334285 (+) True G209284
XR_005637782.1 other upstream 1139983 1594481 ~ 1613738 (+) False LOC120550774
TU283086 other upstream 1176351 1498447 ~ 1577370 (+) True LOC120550772
TU283091 other upstream 1181884 1466018 ~ 1571837 (+) True G208911
TU283964 other downstream 848874 3646009 ~ 3646997 (+) True G209514
TU283994 other downstream 1021718 3818853 ~ 3823251 (+) True LOC120550571
TU283997 other downstream 1024764 3821899 ~ 3823251 (+) False LOC120550571
XR_005637866.1 other downstream 1201238 3998373 ~ 4027498 (+) False LOC120551345
XR_005637777.1 other downstream 2794201 5591336 ~ 5687896 (+) False LOC120550763

Expression Profile