RNA id: TU283715


Basic Information

Item Value
RNA id TU283715
length 228
lncRNA type inter_gene
GC content 0.50
exon number 2
gene id G209344
representative False

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 2671275 ~ 2833674 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

tgcgctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtggttgtttttgtgtgtgtgtgtgtgtgtgggtgtgggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU283713 lncRNA upstream 1236 2681665 ~ 2830051 (+) False G209344
TU283711 lncRNA upstream 1236 2797187 ~ 2830051 (+) False G209344
TU283747 lncRNA upstream 14539 2816427 ~ 2816748 (+) True G209363
TU283738 lncRNA upstream 28341 2780293 ~ 2802946 (+) True G209355
TU283714 lncRNA upstream 34152 2753721 ~ 2797135 (+) False G209344
TU283758 lncRNA downstream 74380 2908054 ~ 2908516 (+) True G209372
TU283761 lncRNA downstream 90311 2923985 ~ 2924270 (+) True G209374
TU283762 lncRNA downstream 109722 2943396 ~ 3010412 (+) True G209375
TU283771 lncRNA downstream 277025 3110699 ~ 3201134 (+) True G209382
TU283770 lncRNA downstream 366325 3199999 ~ 3201134 (+) False G209382
XM_039788750.1 mRNA upstream 297824 2526662 ~ 2533463 (+) True LOC120551356
XM_039789064.1 mRNA upstream 468928 2344346 ~ 2362359 (+) True LOC120551576
XM_039788394.1 mRNA upstream 518838 2302291 ~ 2312449 (+) True LOC120551177
XM_039789062.1 mRNA upstream 532483 2277900 ~ 2298804 (+) True LOC120551574
XM_039789061.1 mRNA upstream 824742 1992977 ~ 2006545 (+) True LOC120551573
XM_039789069.1 mRNA downstream 753405 3587079 ~ 3621179 (+) True LOC120551583
XM_039789071.1 mRNA downstream 836916 3670590 ~ 3687777 (+) True LOC120551587
XM_039787170.1 mRNA downstream 995641 3829315 ~ 3832201 (+) True LOC120550572
XM_039789000.1 mRNA downstream 1108707 3942381 ~ 3943422 (+) True atoh1c
XM_039788724.1 mRNA downstream 1164699 3998373 ~ 4028282 (+) False LOC120551345
TU283706 other upstream 34152 2715645 ~ 2797135 (+) True G209344
TU283630 other upstream 470985 2344281 ~ 2360302 (+) False LOC120551576
TU283626 other upstream 497002 2332178 ~ 2334285 (+) True G209284
XR_005637782.1 other upstream 1217549 1594481 ~ 1613738 (+) False LOC120550774
TU283086 other upstream 1253917 1498447 ~ 1577370 (+) True LOC120550772
TU283964 other downstream 812335 3646009 ~ 3646997 (+) True G209514
TU283994 other downstream 985179 3818853 ~ 3823251 (+) True LOC120550571
TU283997 other downstream 988225 3821899 ~ 3823251 (+) False LOC120550571
XR_005637866.1 other downstream 1164699 3998373 ~ 4027498 (+) False LOC120551345
XR_005637777.1 other downstream 2757662 5591336 ~ 5687896 (+) False LOC120550763

Expression Profile