RNA id: TU284177


Basic Information

Item Value
RNA id TU284177
length 390
lncRNA type inter_gene
GC content 0.45
exon number 1
gene id G209685
representative True

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 4188093 ~ 4188482 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtttaacccttgtgtggtccttcgggtcccggtgacccgaaggacaaaacAAAGGTTAATGCAGCACCTTGGTGCTCGTTTGTgtagcattttggtcagcttaaacggtgtttaaatgtgctaggaaacaaactttacttacttactttacaagagacagggtttagagagcaattctcaacaaaataaacggaagtacatcatccttgtgtggtccttcgggtcccggtgacccaaaggaccacacaagggttaataccagggcctctcctaagtggaatgcagccatcagtaatggtttaataccagggtctctcctaagtggaatgcagccttcagtaatggtttaataccagggtctctcctaagtggaatgcagccatcagtaat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU284176 lncRNA upstream 1373 4183573 ~ 4186720 (+) True G209684
TU284175 lncRNA upstream 1373 4185597 ~ 4186720 (+) False G209684
XR_005637865.1 lncRNA upstream 100255 4085324 ~ 4087838 (+) True LOC120551338
TU284122 lncRNA upstream 145407 4021661 ~ 4042686 (+) True G209650
XR_005637753.1 lncRNA upstream 367473 3819101 ~ 3820620 (+) False LOC120550571
TU284178 lncRNA downstream 3432 4191914 ~ 4192168 (+) True G209686
TU284215 lncRNA downstream 233579 4422061 ~ 4423044 (+) True G209706
TU284226 lncRNA downstream 264682 4453164 ~ 4453398 (+) True G209714
TU284227 lncRNA downstream 265856 4454338 ~ 4455300 (+) True G209715
TU284228 lncRNA downstream 270740 4459222 ~ 4459427 (+) True G209716
XM_039788595.1 mRNA upstream 4976 4171678 ~ 4183117 (+) True chmp6b
XM_039788594.1 mRNA upstream 27795 4118852 ~ 4160298 (+) True abca5
XM_039788630.1 mRNA upstream 69322 4107220 ~ 4118771 (+) False asb3
XM_039788596.1 mRNA downstream 7291 4195773 ~ 4307447 (+) False baiap2b
XM_039788598.1 mRNA downstream 7291 4195773 ~ 4307447 (+) False baiap2b
XM_039788597.1 mRNA downstream 7291 4195773 ~ 4287731 (+) False baiap2b
XM_039788600.1 mRNA downstream 7292 4195774 ~ 4305655 (+) False baiap2b
XM_039788601.1 mRNA downstream 7292 4195774 ~ 4305064 (+) False baiap2b
XR_005637866.1 other upstream 160595 3998373 ~ 4027498 (+) False LOC120551345
TU283994 other upstream 364842 3818853 ~ 3823251 (+) True LOC120550571
TU283997 other upstream 364842 3821899 ~ 3823251 (+) False LOC120550571
TU283964 other upstream 541096 3646009 ~ 3646997 (+) True G209514
TU283708 other upstream 1354419 2779741 ~ 2833674 (+) False G209344
XR_005637777.1 other downstream 1402854 5591336 ~ 5687896 (+) False LOC120550763
XR_005637869.1 other downstream 1894953 6083435 ~ 6092738 (+) False kctd2
TU284934 other downstream 2282174 6470656 ~ 6472155 (+) True G210266
TU285573 other downstream 3869261 8057743 ~ 8062269 (+) True dydc2
XR_005637922.1 other downstream 4011083 8199565 ~ 8199679 (+) True LOC120551817

Expression Profile