RNA id: TU284228



Basic Information


Item Value
RNA id TU284228
length 206
lncRNA type inter_gene
GC content 0.61
exon number 1
gene id G209716
representative True

Chromosome Information


Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 4459222 ~ 4459427 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTACCTCTGCTTGGCtagttccctctctctctgactctgctCGTCCTTCTCCCTCTCCAGCTGTAGGCGGAGCTCCTCACACTGGCGGACGTAGCGCTGGGCCGCGCGGTCGTCTGCCTGCAGCAGCTCCGCCTCGTGGAGTGTCCGCAGCTTTTTCAGGTCCTGTTTGTGCTTGGAGATCAGCTTCTGGATCTCTGGCTCCAGAC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU284227 lncRNA upstream 3922 4454338 ~ 4455300 (+) True G209715
TU284226 lncRNA upstream 5824 4453164 ~ 4453398 (+) True G209714
TU284215 lncRNA upstream 36178 4422061 ~ 4423044 (+) True G209706
TU284178 lncRNA upstream 267054 4191914 ~ 4192168 (+) True G209686
TU284177 lncRNA upstream 270740 4188093 ~ 4188482 (+) True G209685
TU284229 lncRNA downstream 2942 4462369 ~ 4462612 (+) True G209717
TU284230 lncRNA downstream 4812 4464239 ~ 4464464 (+) True G209718
TU284231 lncRNA downstream 12575 4472002 ~ 4472320 (+) True G209719
TU284356 lncRNA downstream 95501 4554928 ~ 4563717 (+) False G209820
TU284357 lncRNA downstream 97345 4556772 ~ 4563717 (+) True G209820
XM_039789281.1 mRNA upstream 47449 4408832 ~ 4411773 (+) True LOC120551740
XM_039789280.1 mRNA upstream 48629 4408832 ~ 4410593 (+) False LOC120551740
XM_039788600.1 mRNA upstream 153567 4195774 ~ 4305655 (+) False baiap2b
XM_039788601.1 mRNA upstream 154158 4195774 ~ 4305064 (+) False baiap2b
XM_039788599.1 mRNA upstream 168361 4195774 ~ 4290861 (+) True baiap2b
XM_039788406.1 mRNA downstream 196890 4656317 ~ 4669139 (+) False LOC120551185
XM_039788405.1 mRNA downstream 203058 4662485 ~ 4670517 (+) True LOC120551185
XM_039788404.1 mRNA downstream 203059 4662486 ~ 4669139 (+) False LOC120551185
XM_039788409.1 mRNA downstream 214810 4674237 ~ 4709578 (+) False map2k6
XM_039788772.1 mRNA downstream 429659 4889086 ~ 4891504 (+) True LOC120551365
XR_005637866.1 other upstream 431724 3998373 ~ 4027498 (+) False LOC120551345
TU283994 other upstream 635971 3818853 ~ 3823251 (+) True LOC120550571
TU283997 other upstream 635971 3821899 ~ 3823251 (+) False LOC120550571
TU283964 other upstream 812225 3646009 ~ 3646997 (+) True G209514
TU283708 other upstream 1625548 2779741 ~ 2833674 (+) False G209344
XR_005637777.1 other downstream 1131909 5591336 ~ 5687896 (+) False LOC120550763
XR_005637869.1 other downstream 1624008 6083435 ~ 6092738 (+) False kctd2
TU284934 other downstream 2011229 6470656 ~ 6472155 (+) True G210266
TU285573 other downstream 3598316 8057743 ~ 8062269 (+) True dydc2
XR_005637922.1 other downstream 3740138 8199565 ~ 8199679 (+) True LOC120551817

Expression Profile