RNA id: TU284655


Basic Information

Item Value
RNA id TU284655
length 247
lncRNA type inter_gene
GC content 0.45
exon number 2
gene id G210070
representative True

Chromosome Information

Item Value
chromosome id NC_053132.1
NCBI id CM020929.1
chromosome length 33651559
location 5348104 ~ 5376130 (+)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ttagagtcaaccgaaacatcgctgcacggggcgctagttaacactacacttggcagcaggtaacattagcctaccgttagctagttaacactacacttggcagcaggtaacgttagcataccgttagctagcagttggatttaacacagttaaaatgctgacagctaaacggtgtaaaggtttgtctctatttccaacacgagacgtacgacagtctgcagctgccgttgtctgaaaaacaacacat

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU284612 lncRNA upstream 118223 5224040 ~ 5229881 (+) True G210030
TU284597 lncRNA upstream 127480 5142615 ~ 5220624 (+) True G210020
TU284604 lncRNA upstream 151501 5196255 ~ 5196603 (+) True G210027
TU284603 lncRNA upstream 155298 5191999 ~ 5192806 (+) True G210026
TU284577 lncRNA upstream 234718 5113161 ~ 5113386 (+) True G210006
TU284672 lncRNA downstream 58919 5435049 ~ 5435714 (+) True G210081
TU284664 lncRNA downstream 85868 5461998 ~ 5479757 (+) False G210077
TU284665 lncRNA downstream 92216 5468346 ~ 5507288 (+) True G210077
TU284667 lncRNA downstream 92216 5468346 ~ 5567878 (+) False G210077
TU284701 lncRNA downstream 149126 5525256 ~ 5525645 (+) True G210109
XM_039789282.1 mRNA upstream 98346 5198751 ~ 5249758 (+) True fmnl1b
XM_039788623.1 mRNA upstream 160442 5146612 ~ 5187662 (+) False ccr10
XM_039787563.1 mRNA downstream 215205 5591335 ~ 5687896 (+) False LOC120550763
XM_039787562.1 mRNA downstream 215206 5591336 ~ 5687896 (+) True LOC120550763
XM_039787565.1 mRNA downstream 224423 5600553 ~ 5687896 (+) False LOC120550763
XM_039787567.1 mRNA downstream 327215 5703345 ~ 5741047 (+) False LOC120550764
XM_039787566.1 mRNA downstream 331230 5707360 ~ 5741047 (+) True LOC120550764
XR_005637866.1 other upstream 1320606 3998373 ~ 4027498 (+) False LOC120551345
TU283994 other upstream 1524853 3818853 ~ 3823251 (+) True LOC120550571
TU283997 other upstream 1524853 3821899 ~ 3823251 (+) False LOC120550571
TU283964 other upstream 1701107 3646009 ~ 3646997 (+) True G209514
TU283708 other upstream 2514430 2779741 ~ 2833674 (+) False G209344
XR_005637777.1 other downstream 215206 5591336 ~ 5687896 (+) False LOC120550763
XR_005637869.1 other downstream 707305 6083435 ~ 6092738 (+) False kctd2
TU284934 other downstream 1094526 6470656 ~ 6472155 (+) True G210266
TU285573 other downstream 2681613 8057743 ~ 8062269 (+) True dydc2
XR_005637922.1 other downstream 2823435 8199565 ~ 8199679 (+) True LOC120551817

Expression Profile