Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039788822.1 |
| length | 1898 |
| RNA type | mRNA |
| GC content | 0.54 |
| exon number | 9 |
| gene id | ptenb |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053132.1 |
| NCBI id | CM020929.1 |
| chromosome length | 33651559 |
| location | 1181045 ~ 1193221 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0046855 | inositol phosphate dephosphorylation | biological_process |
| GO:0046856 | phosphatidylinositol dephosphorylation | biological_process |
| GO:0035335 | peptidyl-tyrosine dephosphorylation | biological_process |
| GO:0031647 | regulation of protein stability | biological_process |
| GO:0008285 | negative regulation of cell population proliferation | biological_process |
| GO:0051895 | negative regulation of focal adhesion assembly | biological_process |
| GO:0051898 | negative regulation of protein kinase B signaling | biological_process |
| GO:0030336 | negative regulation of cell migration | biological_process |
| GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | molecular_function |
| GO:0030165 | PDZ domain binding | molecular_function |
| GO:0051800 | phosphatidylinositol-3,4-bisphosphate 3-phosphatase activity | molecular_function |
| GO:0016314 | phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase activity | molecular_function |
| GO:0004725 | protein tyrosine phosphatase activity | molecular_function |
| GO:0000287 | magnesium ion binding | molecular_function |
| id | description |
|---|---|
| K01110 | PTEN; phosphatidylinositol-3,4,5-trisphosphate 3-phosphatase and dual-specificity protein phosphatase PTEN |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU283001 | lncRNA | upstream | 80197 | 1099315 ~ 1100848 (+) | True | G208853 |
| TU282985 | lncRNA | upstream | 87300 | 1015928 ~ 1093745 (+) | True | G208841 |
| XR_005637877.1 | lncRNA | upstream | 97611 | 1071580 ~ 1083434 (+) | True | LOC120551440 |
| TU282996 | lncRNA | upstream | 122617 | 1056886 ~ 1058428 (+) | True | G208850 |
| TU282881 | lncRNA | upstream | 131417 | 1039125 ~ 1049628 (+) | True | G208784 |
| XR_005637874.1 | lncRNA | downstream | 5701 | 1198922 ~ 1200173 (+) | True | LOC120551437 |
| TU283021 | lncRNA | downstream | 5701 | 1198922 ~ 1200103 (+) | False | LOC120551437 |
| TU283025 | lncRNA | downstream | 5701 | 1198922 ~ 1200138 (+) | False | LOC120551437 |
| TU283029 | lncRNA | downstream | 5701 | 1198922 ~ 1200103 (+) | False | LOC120551437 |
| TU283031 | lncRNA | downstream | 5701 | 1198922 ~ 1200103 (+) | False | LOC120551437 |
| XM_039788845.1 | mRNA | upstream | 91885 | 1043694 ~ 1089160 (+) | False | LOC120551414 |
| XM_039788844.1 | mRNA | upstream | 91885 | 1084225 ~ 1089160 (+) | True | LOC120551414 |
| XM_039788854.1 | mRNA | upstream | 131435 | 1043672 ~ 1049610 (+) | True | LOC120551421 |
| XM_039788855.1 | mRNA | upstream | 141676 | 1027307 ~ 1039369 (+) | True | LOC120551422 |
| XM_039788862.1 | mRNA | upstream | 162155 | 1015297 ~ 1018890 (+) | True | LOC120551430 |
| XM_039788823.1 | mRNA | downstream | 18507 | 1211728 ~ 1235822 (+) | True | lipf |
| XM_039788820.1 | mRNA | downstream | 104806 | 1298027 ~ 1303083 (+) | True | LOC120551397 |
| XM_039788821.1 | mRNA | downstream | 104808 | 1298029 ~ 1303083 (+) | False | LOC120551397 |
| XM_039788864.1 | mRNA | downstream | 119980 | 1313201 ~ 1327465 (+) | True | stambpl1 |
| XM_039788831.1 | mRNA | downstream | 185430 | 1378651 ~ 1380831 (+) | True | LOC120551407 |
| TU283000 | other | upstream | 87448 | 1090547 ~ 1093597 (+) | True | G208852 |
| TU282997 | other | upstream | 121605 | 1058842 ~ 1059440 (+) | True | G208851 |
| TU282854 | other | upstream | 525825 | 654899 ~ 655220 (+) | True | G208768 |
| TU282836 | other | upstream | 623552 | 514197 ~ 557493 (+) | False | LOC120551395 |
| TU282798 | other | upstream | 630968 | 536938 ~ 550077 (+) | True | G208758 |
| TU283035 | other | downstream | 11369 | 1204590 ~ 1205248 (+) | True | G208867 |
| TU282870 | other | downstream | 237288 | 1430509 ~ 1493181 (+) | False | G208777 |
| TU283091 | other | downstream | 272797 | 1466018 ~ 1571837 (+) | True | G208911 |
| TU283086 | other | downstream | 305226 | 1498447 ~ 1577370 (+) | True | LOC120550772 |
| XR_005637782.1 | other | downstream | 401260 | 1594481 ~ 1613738 (+) | False | LOC120550774 |
