Gene
RNA
| Item | Value |
|---|---|
| RNA id | XM_039789062.1 |
| length | 1120 |
| RNA type | mRNA |
| GC content | 0.58 |
| exon number | 10 |
| gene id | LOC120551574 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053132.1 |
| NCBI id | CM020929.1 |
| chromosome length | 33651559 |
| location | 2277900 ~ 2298804 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0006099 | tricarboxylic acid cycle | biological_process |
| GO:0051287 | NAD binding | molecular_function |
| GO:0004449 | isocitrate dehydrogenase (NAD+) activity | molecular_function |
| GO:0000287 | magnesium ion binding | molecular_function |
| id | description |
|---|---|
| K00030 | IDH3; isocitrate dehydrogenase (NAD+) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU283611 | lncRNA | upstream | 8472 | 2251690 ~ 2269428 (+) | True | G209275 |
| TU283546 | lncRNA | upstream | 183182 | 2047861 ~ 2094718 (+) | True | G209234 |
| TU283549 | lncRNA | upstream | 200419 | 2076265 ~ 2077481 (+) | True | G209237 |
| TU283160 | lncRNA | upstream | 246184 | 2031341 ~ 2031716 (+) | True | G208970 |
| TU283153 | lncRNA | upstream | 268770 | 2007295 ~ 2009130 (+) | True | G208963 |
| TU283619 | lncRNA | downstream | 1638 | 2300442 ~ 2301400 (+) | True | G209281 |
| TU283620 | lncRNA | downstream | 1638 | 2300442 ~ 2301400 (+) | False | G209281 |
| TU283622 | lncRNA | downstream | 24720 | 2323524 ~ 2324079 (+) | True | G209283 |
| TU283623 | lncRNA | downstream | 24720 | 2323524 ~ 2324079 (+) | False | G209283 |
| TU283625 | lncRNA | downstream | 24720 | 2323524 ~ 2324079 (+) | False | G209283 |
| XM_039789061.1 | mRNA | upstream | 271355 | 1992977 ~ 2006545 (+) | True | LOC120551573 |
| XM_039789261.1 | mRNA | upstream | 614436 | 1648435 ~ 1663464 (+) | True | rpp30 |
| XM_039789059.1 | mRNA | upstream | 641765 | 1616722 ~ 1636135 (+) | True | noc3l |
| XM_039787610.1 | mRNA | upstream | 661820 | 1594481 ~ 1616080 (+) | False | LOC120550774 |
| XM_039788394.1 | mRNA | downstream | 3487 | 2302291 ~ 2312449 (+) | True | LOC120551177 |
| XM_039789064.1 | mRNA | downstream | 45542 | 2344346 ~ 2362359 (+) | True | LOC120551576 |
| XM_039788750.1 | mRNA | downstream | 227858 | 2526662 ~ 2533463 (+) | True | LOC120551356 |
| XM_039789069.1 | mRNA | downstream | 1288275 | 3587079 ~ 3621179 (+) | True | LOC120551583 |
| XM_039789071.1 | mRNA | downstream | 1371786 | 3670590 ~ 3687777 (+) | True | LOC120551587 |
| XR_005637782.1 | other | upstream | 664162 | 1594481 ~ 1613738 (+) | False | LOC120550774 |
| TU283086 | other | upstream | 700530 | 1498447 ~ 1577370 (+) | True | LOC120550772 |
| TU283091 | other | upstream | 706063 | 1466018 ~ 1571837 (+) | True | G208911 |
| TU282870 | other | upstream | 784719 | 1430509 ~ 1493181 (+) | False | G208777 |
| TU283035 | other | upstream | 1072652 | 1204590 ~ 1205248 (+) | True | G208867 |
| TU283626 | other | downstream | 33374 | 2332178 ~ 2334285 (+) | True | G209284 |
| TU283630 | other | downstream | 45477 | 2344281 ~ 2360302 (+) | False | LOC120551576 |
| TU283706 | other | downstream | 416841 | 2715645 ~ 2797135 (+) | True | G209344 |
| TU283708 | other | downstream | 480937 | 2779741 ~ 2833674 (+) | False | G209344 |
| TU283964 | other | downstream | 1347205 | 3646009 ~ 3646997 (+) | True | G209514 |
