Gene
RNA
| Item | Value |
|---|---|
| RNA id | XR_005637787.1 |
| length | 860 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 4 |
| gene id | LOC120550777 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053132.1 |
| NCBI id | CM020929.1 |
| chromosome length | 33651559 |
| location | 10944929 ~ 10946643 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005637785.1 | lncRNA | upstream | 664 | 10937601 ~ 10944265 (+) | False | LOC120550775 |
| XR_005637784.1 | lncRNA | upstream | 664 | 10941297 ~ 10944265 (+) | True | LOC120550775 |
| XR_005637783.1 | lncRNA | upstream | 664 | 10941918 ~ 10944265 (+) | False | LOC120550775 |
| TU286429 | lncRNA | upstream | 32831 | 10819058 ~ 10912098 (+) | False | kcng3 |
| TU286430 | lncRNA | upstream | 48220 | 10819058 ~ 10896709 (+) | True | kcng3 |
| TU286508 | lncRNA | downstream | 126855 | 11073498 ~ 11077953 (+) | False | chac2 |
| TU286510 | lncRNA | downstream | 133472 | 11080115 ~ 11080410 (+) | True | G211417 |
| TU286820 | lncRNA | downstream | 506578 | 11453221 ~ 11457561 (+) | True | LOC120550877 |
| XR_005637798.1 | lncRNA | downstream | 506585 | 11453228 ~ 11456684 (+) | False | LOC120550877 |
| TU286879 | lncRNA | downstream | 778498 | 11725141 ~ 11727426 (+) | True | G211665 |
| XM_039788979.1 | mRNA | upstream | 18219 | 10922423 ~ 10926710 (+) | False | cript |
| XM_039789383.1 | mRNA | upstream | 37585 | 10902694 ~ 10907344 (+) | True | LOC120551799 |
| XM_039789404.1 | mRNA | upstream | 47547 | 10892778 ~ 10897382 (+) | False | kcng3 |
| XM_039787810.1 | mRNA | upstream | 229699 | 10703361 ~ 10715230 (+) | False | sncgb |
| XM_039787615.1 | mRNA | downstream | 5544 | 10952187 ~ 10962659 (+) | True | msh2 |
| XM_039789382.1 | mRNA | downstream | 126834 | 11073477 ~ 11078007 (+) | True | chac2 |
| XM_039787819.1 | mRNA | downstream | 174568 | 11121211 ~ 11141363 (+) | True | LOC120550886 |
| XM_039787827.1 | mRNA | downstream | 196741 | 11143384 ~ 11147383 (+) | True | LOC120550888 |
| XM_039787174.1 | mRNA | downstream | 295956 | 11242599 ~ 11244396 (+) | True | LOC120550580 |
| TU286461 | other | upstream | 17703 | 10922448 ~ 10927226 (+) | True | cript |
| TU286458 | other | upstream | 37612 | 10902704 ~ 10907317 (+) | False | LOC120551799 |
| TU286436 | other | upstream | 140957 | 10801340 ~ 10803972 (+) | True | G211354 |
| TU286403 | other | upstream | 219370 | 10723533 ~ 10725559 (+) | True | G211336 |
| TU286399 | other | upstream | 229575 | 10702966 ~ 10715354 (+) | False | sncgb |
| XR_005637797.1 | other | downstream | 416712 | 11363355 ~ 11400578 (+) | False | LOC120550876 |
| TU287023 | other | downstream | 1141042 | 12087685 ~ 12088135 (+) | True | G211777 |
| XR_005637885.1 | other | downstream | 1603934 | 12550577 ~ 12597021 (+) | False | LOC120551485 |
| unassigned_transcript_1166 | other | downstream | 1664178 | 12610821 ~ 12610902 (+) | True | trnal-aag_11 |
| TU287259 | other | downstream | 1774215 | 12720858 ~ 12809117 (+) | False | LOC120551603 |
