RNA id: TU294029


Basic Information

Item Value
RNA id TU294029
length 200
lncRNA type inter_gene
GC content 0.25
exon number 1
gene id G217221
representative True

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 213858 ~ 214057 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ccaaaatgtaaatttgttttctaaaatgttattttgttttccaaaatgtaaatttgttttctaaaatgttattttgttttctaaaatgtaaatttgttttctaaaatgttattttgttttccaaaatgtaaatttgttttccaaaatgtaaaagtgtttcattctttgtaatgttgcattgcacttcccggccaccgtac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU294027 lncRNA downstream 55293 157558 ~ 158565 (-) True G217219
XR_005637947.1 lncRNA downstream 110861 102140 ~ 102997 (-) True LOC120551975
XR_005637946.1 lncRNA downstream 111725 79571 ~ 102133 (-) True LOC120551974
XR_005638062.1 lncRNA downstream 175732 35892 ~ 38126 (-) True LOC120552669
TU294037 lncRNA upstream 195341 409398 ~ 410145 (-) True G217229
TU294039 lncRNA upstream 233727 447784 ~ 448010 (-) True G217231
TU294040 lncRNA upstream 286704 500761 ~ 501338 (-) True G217232
TU294046 lncRNA upstream 342092 556149 ~ 563293 (-) True G217238
TU294048 lncRNA upstream 352609 566666 ~ 577547 (-) True G217240
XM_039790874.1 mRNA upstream 80254 294311 ~ 401826 (-) True vstm2a
XM_039789542.1 mRNA upstream 984552 1198609 ~ 1200210 (-) True LOC120551945
XM_039789537.1 mRNA upstream 1107381 1321438 ~ 1332410 (-) True LOC120551939
XM_039789599.1 mRNA upstream 1141431 1355488 ~ 1448275 (-) True si:dkey-225n22.4
XM_039789605.1 mRNA upstream 1293679 1507736 ~ 1536190 (-) True ift74
unassigned_transcript_1299 other upstream 3095442 3309499 ~ 3309570 (-) True trnag-ucc_41
XR_005638064.1 other upstream 3102391 3316448 ~ 3343705 (-) False LOC120552696
unassigned_transcript_1300 other upstream 3360674 3574731 ~ 3574828 (-) True trnar-ucu_17
unassigned_transcript_1301 other upstream 3361019 3575076 ~ 3575173 (-) True trnar-ucu_18
unassigned_transcript_1302 other upstream 3361705 3575762 ~ 3575859 (-) True trnar-ucu_19

Expression Profile