RNA id: TU294059


Basic Information

Item Value
RNA id TU294059
length 447
lncRNA type inter_gene
GC content 0.43
exon number 2
gene id G217247
representative True

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 693504 ~ 694424 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTAATGCAACACTTATGGATGCCAACTGCTGTTAAACCACATGAAGAAGCCTTGTTAAATGTTTCAGAGAGACGGTTGGCACCATAGACATAATAGAATCTACTTGATGTTCCTCCAGATCTGACTGATCAGATGCTGTCCTGGACACCTGTTTGATGAGGTTTACCTGGACCCACAAGACTCTCCTCACAGTATGAAGGTATTGTGGGACAGGTGCCATACTTCTGCCAAGTGATGATGGTCTGAAGACAACACAGCAGCATCAGGACAGATTCAGTATCCACAGGATGACTTCTGTGACCTGAGAGCCTACATTACCAGCTGACACATCCTCAGTAGAAAATAAACCCTTTAATCTGGGTGAGGACATGATCTGGACTGTTATCTGCTactctgtgcattatgtatACACACTTTGTATTTACATTTCATTGACTATGAATAAAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU294050 lncRNA downstream 110571 582699 ~ 582933 (-) True G217241
TU294048 lncRNA downstream 115957 566666 ~ 577547 (-) True G217240
TU294049 lncRNA downstream 116293 566666 ~ 577211 (-) False G217240
TU294046 lncRNA downstream 130211 556149 ~ 563293 (-) True G217238
TU294040 lncRNA downstream 192166 500761 ~ 501338 (-) True G217232
TU294071 lncRNA upstream 90847 785271 ~ 785573 (-) True G217259
TU294080 lncRNA upstream 170146 864570 ~ 864800 (-) True G217267
TU294152 lncRNA upstream 659801 1354225 ~ 1354503 (-) True G217330
TU294158 lncRNA upstream 660833 1355257 ~ 1355603 (-) False si:dkey-225n22.4
TU294257 lncRNA upstream 1055939 1750363 ~ 1811052 (-) False LOC120552169
XM_039790874.1 mRNA downstream 291678 294311 ~ 401826 (-) True vstm2a
XM_039789542.1 mRNA upstream 504185 1198609 ~ 1200210 (-) True LOC120551945
XM_039789537.1 mRNA upstream 627014 1321438 ~ 1332410 (-) True LOC120551939
XM_039789599.1 mRNA upstream 661064 1355488 ~ 1448275 (-) True si:dkey-225n22.4
XM_039789605.1 mRNA upstream 813312 1507736 ~ 1536190 (-) True ift74
XM_039789961.1 mRNA upstream 963748 1658172 ~ 1811130 (-) True LOC120552169
unassigned_transcript_1299 other upstream 2615075 3309499 ~ 3309570 (-) True trnag-ucc_41
XR_005638064.1 other upstream 2622024 3316448 ~ 3343705 (-) False LOC120552696
unassigned_transcript_1300 other upstream 2880307 3574731 ~ 3574828 (-) True trnar-ucu_17
unassigned_transcript_1301 other upstream 2880652 3575076 ~ 3575173 (-) True trnar-ucu_18
unassigned_transcript_1302 other upstream 2881338 3575762 ~ 3575859 (-) True trnar-ucu_19

Expression Profile