Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU294312 |
| length | 965 |
| lncRNA type | sense_over |
| GC content | 0.43 |
| exon number | 3 |
| gene id | G217449 |
| representative | False |
| Item | Value |
|---|---|
| chromosome id | NC_053133.1 |
| NCBI id | CM020930.1 |
| chromosome length | 31697812 |
| location | 2262547 ~ 2438589 (+) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| XR_005637954.1 | lncRNA | upstream | 15291 | 2409885 ~ 2416466 (+) | True | LOC120552009 |
| XR_005637951.1 | lncRNA | upstream | 76401 | 2352859 ~ 2355356 (+) | True | LOC120552006 |
| TU294335 | lncRNA | upstream | 76662 | 2351351 ~ 2355095 (+) | False | LOC120552006 |
| TU294334 | lncRNA | upstream | 76662 | 2352835 ~ 2355095 (+) | False | LOC120552006 |
| TU294324 | lncRNA | upstream | 119136 | 2305543 ~ 2312621 (+) | True | G217459 |
| TU294360 | lncRNA | downstream | 125783 | 2563663 ~ 2563878 (+) | True | G217489 |
| TU294353 | lncRNA | downstream | 234058 | 2671938 ~ 2673750 (+) | True | G217482 |
| TU294510 | lncRNA | downstream | 563970 | 3001850 ~ 3003104 (+) | True | G217604 |
| TU294518 | lncRNA | downstream | 571309 | 3009189 ~ 3011361 (+) | True | G217608 |
| TU294519 | lncRNA | downstream | 571309 | 3009189 ~ 3011592 (+) | False | G217608 |
| XM_039789614.1 | mRNA | upstream | 118331 | 2258920 ~ 2313426 (+) | True | LOC120552004 |
| XM_039789603.1 | mRNA | upstream | 902448 | 1523394 ~ 1529309 (+) | True | LOC120551998 |
| XM_039789604.1 | mRNA | upstream | 902448 | 1523394 ~ 1529309 (+) | False | LOC120551998 |
| XM_039789602.1 | mRNA | upstream | 926542 | 1462750 ~ 1505215 (+) | False | zcchc2 |
| XM_039789655.1 | mRNA | downstream | 20779 | 2458659 ~ 2558626 (+) | False | slc12a7b |
| XM_039789657.1 | mRNA | downstream | 20779 | 2458659 ~ 2558626 (+) | False | slc12a7b |
| XM_039789659.1 | mRNA | downstream | 20779 | 2458659 ~ 2558626 (+) | False | slc12a7b |
| XM_039789660.1 | mRNA | downstream | 20779 | 2458659 ~ 2558626 (+) | False | slc12a7b |
| XM_039789658.1 | mRNA | downstream | 42886 | 2480766 ~ 2558626 (+) | True | slc12a7b |
| TU294210 | other | upstream | 756357 | 1669162 ~ 1675400 (+) | False | G217377 |
| TU294211 | other | upstream | 756357 | 1671847 ~ 1675400 (+) | True | G217377 |
| unassigned_transcript_1282 | other | upstream | 780109 | 1651577 ~ 1651648 (+) | True | trnan-guu_46 |
| unassigned_transcript_1281 | other | upstream | 780617 | 1651067 ~ 1651140 (+) | True | trnan-guu_45 |
| unassigned_transcript_1280 | other | upstream | 782086 | 1649598 ~ 1649671 (+) | True | trnan-guu_44 |
| TU294514 | other | downstream | 568403 | 3006283 ~ 3021642 (+) | True | G217606 |
| unassigned_transcript_1283 | other | downstream | 729863 | 3167743 ~ 3167824 (+) | True | trnas-aga_12 |
| unassigned_transcript_1284 | other | downstream | 730907 | 3168787 ~ 3168858 (+) | True | trnag-ucc_35 |
| unassigned_transcript_1285 | other | downstream | 731205 | 3169085 ~ 3169166 (+) | True | trnas-aga_13 |
| unassigned_transcript_1286 | other | downstream | 743418 | 3181298 ~ 3181369 (+) | True | trnag-ucc_36 |
