Gene
RNA
| Item | Value |
|---|---|
| RNA id | TU295764 |
| length | 586 |
| lncRNA type | inter_gene |
| GC content | 0.43 |
| exon number | 1 |
| gene id | G218522 |
| representative | True |
| Item | Value |
|---|---|
| chromosome id | NC_053133.1 |
| NCBI id | CM020930.1 |
| chromosome length | 31697812 |
| location | 8634100 ~ 8634685 (-) |
| genome version | GENO_Pfluv_1.0_2020_eurasian_perch_Genome |
| species | eurasian perch (Perca fluviatilis) |
| id | name | namespace |
|---|---|---|
| GO:0021591 | ventricular system development | biological_process |
| GO:0021592 | fourth ventricle development | biological_process |
| GO:0031589 | cell-substrate adhesion | biological_process |
| GO:0030902 | hindbrain development | biological_process |
| GO:0007160 | cell-matrix adhesion | biological_process |
| RNA id | RNA type | direction | distance | location | representative | gene id |
|---|---|---|---|---|---|---|
| TU295736 | lncRNA | downstream | 37696 | 8547773 ~ 8596404 (-) | True | G218503 |
| TU295737 | lncRNA | downstream | 37696 | 8558205 ~ 8596404 (-) | False | G218503 |
| TU295699 | lncRNA | downstream | 100556 | 8522950 ~ 8533544 (-) | True | G218469 |
| TU295708 | lncRNA | downstream | 174390 | 8459498 ~ 8459710 (-) | True | G218477 |
| TU295704 | lncRNA | downstream | 198151 | 8435049 ~ 8435949 (-) | True | G218473 |
| TU295812 | lncRNA | upstream | 102459 | 8737144 ~ 8739902 (-) | True | G218561 |
| TU295814 | lncRNA | upstream | 109162 | 8743847 ~ 8744309 (-) | True | G218563 |
| TU295820 | lncRNA | upstream | 114908 | 8749593 ~ 8750452 (-) | True | G218568 |
| TU295823 | lncRNA | upstream | 118826 | 8753511 ~ 8754861 (-) | True | G218571 |
| TU295840 | lncRNA | upstream | 155143 | 8789828 ~ 8791965 (-) | True | G218587 |
| XM_039790138.1 | mRNA | downstream | 136086 | 8476127 ~ 8498014 (-) | False | snx16 |
| XM_039789686.1 | mRNA | upstream | 4856 | 8639541 ~ 8712753 (-) | True | LOC120552041 |
| XM_039789687.1 | mRNA | upstream | 89764 | 8724449 ~ 8734819 (-) | True | LOC120552044 |
| XM_039790545.1 | mRNA | upstream | 133535 | 8768220 ~ 8779822 (-) | True | ncf2 |
| XM_039790552.1 | mRNA | upstream | 163096 | 8797781 ~ 8851726 (-) | True | prkdc |
| XM_039789528.1 | mRNA | upstream | 322724 | 8957409 ~ 8970638 (-) | False | LOC120551928 |
| TU295702 | other | downstream | 203170 | 8430464 ~ 8430930 (-) | True | G218471 |
| TU295672 | other | downstream | 438221 | 8194929 ~ 8195879 (-) | True | G218453 |
| unassigned_transcript_1411 | other | downstream | 1292205 | 7341824 ~ 7341895 (-) | True | trnaw-cca_34 |
| unassigned_transcript_1410 | other | downstream | 1331333 | 7302696 ~ 7302767 (-) | True | trnaw-cca_33 |
| unassigned_transcript_1409 | other | downstream | 1332960 | 7301069 ~ 7301140 (-) | True | trnaw-cca_32 |
| TU296313 | other | upstream | 1942714 | 10577399 ~ 10669527 (-) | True | G218950 |
| TU296891 | other | upstream | 4554968 | 13189653 ~ 13194041 (-) | False | bmi1a |
| XR_005637977.1 | other | upstream | 5053736 | 13688421 ~ 13696741 (-) | True | pdk3a |
| XR_005637996.1 | other | upstream | 5190108 | 13824793 ~ 13940381 (-) | False | sema5a |
| TU297468 | other | upstream | 6411463 | 15046148 ~ 15048663 (-) | False | xkr9 |
