RNA id: TU298948


Basic Information

Item Value
RNA id TU298948
length 1236
RNA type TUCP
GC content 0.49
exon number 8
gene id mettl4
representative False

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 18938913 ~ 18949495 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

AATGAAAACAGCAGCACGCAGCTGAGCCTCGCGCTCTACTTTCGGTATCGTTTTCAGGGAAATCGAGTTGTTTCGTCGTTttaatggttttaataatcaTGCCAGCTAGTTTTAACCATTAGTTTTCTCGATGGCCGTGGTGGTTCTGAACACGCAGGGCTGGGTTTTAGATGCACGCTCACTCATTGATCAGGGGTATTCGCGTTGCATCCGatttataaataataatcaaaagTCACATATAAACTGCCTTTTCAAAAGGCAGTGTTTTCAGAATGTAAAAAGCCATTATAGTGCCAGTGATGCCGTGGATGGAGGGAACACGGATATGTTGCAGAAAACAGACAAACCGTCAAAGAAAAGGAAACGAAAACACAGTGAACTCAACCACGGGGAAGTTGATTCACAGGCCTTCCATGAGAAGAGAACAGGGTGGACTGGGCTACAGTGGTCACACTGATGGGAGAGGAATATGTAATACCACCACACACAGCCTTCCTGCTTTCTGATTTCACAAGAATACAGCCCCTAGTCCACTATGGAAGGAGGTTTGACTTAATAGTTATGGATCCACCGTGGGAAAACAAGTCTGTGAAAAGGAGTCGCAGGTACAGTTCTTTGCCCTCATCCCAGCTCAAACGGCTCCCTATCCCTCTACTGGCCTCCGTGAACTGTTTAGTGGTCACCTGGGTCACAAATCGGCCCAGCCACCTGCGTTTTGTCCGTGATGAGCTGTATCCACACTGGGGGGTAGAAGTTGTGGCCGAATGGTTCTGGGTCAAGGTAACCACATCTGGCCAGTTTGTGTTTCCACTGGATTCACATCATAAGAAGCCTTATGAGGTGCTGGTGCTGGGCCGATATCGTTCCGCTGCAGATGACACCACAAGCTCTTCAGAGACATCAGAGCTTCCTGTGGAGGATCAGCGTTTGATTGTCAGCGTCCCATCAGCTCTCCACTCCCAGAAGCCGTCCCTCTCAgaGGTGTTGAAGCCCTACATCAGAGCTGAAGCAAAGTGCTTGGAGCTGTTTGCCCGAAGTCTTCAACCTGGTTGGACCAGCTGGGGCAACGAAGTGCTAAAATTTCAGCACACAAGCTATTTCACTTTGACACCTACAGATGATGGAACGAACGTCCCAAAAGACGAGGCTGCAGATGACTGCGCAGACAAACCCACACTCACACCATTGTTAAGCTCACCTGGAGAATCCTCTCGTCACAGTCGCTGTCCCACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU298921 lncRNA downstream 109014 18829751 ~ 18829985 (-) True G220893
TU298915 lncRNA downstream 122621 18815906 ~ 18816378 (-) True G220888
TU298903 lncRNA downstream 165502 18772981 ~ 18773497 (-) False LOC120552352
TU298879 lncRNA downstream 198383 18740417 ~ 18740616 (-) True G220860
TU298818 lncRNA downstream 241029 18610236 ~ 18697970 (-) False G220833
TU299030 lncRNA upstream 90784 19040265 ~ 19043216 (-) True G220972
TU299031 lncRNA upstream 90784 19040265 ~ 19043216 (-) False G220972
TU299033 lncRNA upstream 90784 19040265 ~ 19043216 (-) False G220972
XR_005637963.1 lncRNA upstream 367173 19316654 ~ 19317227 (-) True LOC120552156
TU299179 lncRNA upstream 423110 19372591 ~ 19374516 (-) True G221086
XM_039789989.1 mRNA downstream 85383 18831587 ~ 18853616 (-) True LOC120552191
XM_039789990.1 mRNA downstream 91753 18831587 ~ 18847246 (-) False LOC120552191
XM_039789988.1 mRNA downstream 112117 18821982 ~ 18826882 (-) True enosf1
XM_039790345.1 mRNA downstream 128055 18772977 ~ 18810944 (-) True LOC120552352
XM_039789520.1 mRNA downstream 176153 18756353 ~ 18762846 (-) True LOC120551921
XM_039790253.1 mRNA upstream 39700 18989181 ~ 19005165 (-) True LOC120552316
XM_039790254.1 mRNA upstream 39700 18989181 ~ 19000838 (-) False LOC120552316
XM_039790252.1 mRNA upstream 39700 18989181 ~ 19000344 (-) False LOC120552316
XM_039790246.1 mRNA upstream 57162 19006643 ~ 19036833 (-) False myom1b
XM_039790244.1 mRNA upstream 57162 19006643 ~ 19036833 (-) False myom1b
TU298817 other downstream 307524 18610236 ~ 18631475 (-) True G220833
unassigned_transcript_1418 other downstream 314201 18624726 ~ 18624798 (-) True trnar-ccg_3
TU298248 other downstream 2063699 16874649 ~ 16875300 (-) True G220412
XR_005637973.1 other downstream 2143875 16783069 ~ 16795124 (-) False LOC120552205
XR_005638013.1 other downstream 2654264 16266303 ~ 16284735 (-) False drd3
TU299133 other upstream 366110 19315591 ~ 19326894 (-) True G221048
TU299660 other upstream 1886816 20836297 ~ 20862665 (-) False LOC120552536
XR_005637957.1 other upstream 3040536 21990017 ~ 22009088 (-) True tfr1b
TU300141 other upstream 3253302 22202783 ~ 22218366 (-) False smpx
TU300142 other upstream 3253302 22202783 ~ 22217549 (-) True smpx

Expression Profile