RNA id: TU299625



Basic Information


Item Value
RNA id TU299625
length 363
lncRNA type inter_gene
GC content 0.58
exon number 1
gene id G221417
representative True

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 20766599 ~ 20766961 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TCTGCccctcagactgacgacggcacgggacacaccgaacagactcgagtcactgacctcgccagactgtccgacggccgataatctccttggtgtgtcagcacctaTGCCAcatcagggggcgtggctatctctcacattcagaacagagccGTGGGCAAAAAAAGGCTGGAGAAGTGAGAGTGCAACACGACCGGCAGTTCGCGGTGCTGTGTGCAGAGCCTACAGTCCcatattctggggtaactagaccaccaactagcGCTGACCTGACAGAGCACCACAACAGGCAGCTCGTGGTAGGCCTACTCTGTCCACTGCGGGTTGACACGACAGCTGAGGCGTTGTTAAGTGAGCTAGCGg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU299623 lncRNA downstream 4522 20761859 ~ 20762077 (-) True G221415
TU299601 lncRNA downstream 7825 20686190 ~ 20758774 (-) False G221400
TU299600 lncRNA downstream 34357 20686190 ~ 20732242 (-) True G221400
TU299578 lncRNA downstream 198815 20567559 ~ 20567784 (-) True G221385
TU299546 lncRNA downstream 297146 20469146 ~ 20469453 (-) True G221359
TU299644 lncRNA upstream 28910 20795871 ~ 20821240 (-) True G221433
TU299690 lncRNA upstream 145525 20912486 ~ 20912751 (-) True G221471
TU299691 lncRNA upstream 193667 20960628 ~ 20960830 (-) True G221472
TU299692 lncRNA upstream 195877 20962838 ~ 20963223 (-) True G221473
TU299717 lncRNA upstream 296552 21063513 ~ 21064001 (-) True G221498
XM_039790579.1 mRNA downstream 7805 20747747 ~ 20758794 (-) False LOC120552480
XM_039790578.1 mRNA downstream 7854 20747747 ~ 20758745 (-) True LOC120552480
XM_039789573.1 mRNA downstream 25206 20735026 ~ 20741393 (-) False LOC120551976
XM_039790670.1 mRNA upstream 68217 20835178 ~ 20862688 (-) True LOC120552536
XM_039790186.1 mRNA upstream 97882 20864843 ~ 20872952 (-) False zgc:111976
XM_039790187.1 mRNA upstream 97882 20864843 ~ 20872252 (-) False zgc:111976
XM_039790185.1 mRNA upstream 97882 20864843 ~ 20872252 (-) True zgc:111976
XM_039790669.1 mRNA upstream 450719 21217680 ~ 21221667 (-) False rbis
TU299133 other downstream 1439705 19315591 ~ 19326894 (-) True G221048
TU298948 other downstream 1817118 18938999 ~ 18949481 (-) False mettl4
TU298817 other downstream 2135124 18610236 ~ 18631475 (-) True G220833
unassigned_transcript_1418 other downstream 2141801 18624726 ~ 18624798 (-) True trnar-ccg_3
TU298248 other downstream 3891299 16874649 ~ 16875300 (-) True G220412
TU299660 other upstream 69336 20836297 ~ 20862665 (-) False LOC120552536
XR_005637957.1 other upstream 1223056 21990017 ~ 22009088 (-) True tfr1b
TU300141 other upstream 1435822 22202783 ~ 22218366 (-) False smpx
TU300142 other upstream 1435822 22202783 ~ 22217549 (-) True smpx
TU301970 other upstream 4196484 24963445 ~ 24967990 (-) False msl2b

Expression Profile