RNA id: TU300269



Basic Information


Item Value
RNA id TU300269
length 388
lncRNA type inter_gene
GC content 0.39
exon number 1
gene id G221928
representative True

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 22981964 ~ 22982351 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tgtgggactggctctagtggctgtaattctgcaccaaggctgaatttcaggaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggacgactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggcctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattagggaaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggtctatataaaagagacttcagatacagtattaggggaccactaaggcttatataaaagagacttcagat

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU300267 lncRNA downstream 21304 22959366 ~ 22960660 (-) True G221926
TU300182 lncRNA downstream 642094 22337075 ~ 22339870 (-) True G221857
XR_005638025.1 lncRNA downstream 646480 22325273 ~ 22335484 (-) True LOC120552529
TU300161 lncRNA downstream 673730 22307488 ~ 22308234 (-) True G221844
TU300160 lncRNA downstream 680749 22300418 ~ 22301215 (-) True G221843
TU300274 lncRNA upstream 57498 23039849 ~ 23040134 (-) True G221933
XR_005638061.1 lncRNA upstream 88603 23070954 ~ 23071831 (-) False LOC120552653
XR_005638060.1 lncRNA upstream 88603 23070954 ~ 23071535 (-) True LOC120552653
TU300293 lncRNA upstream 137427 23119778 ~ 23120288 (-) True G221950
TU300305 lncRNA upstream 274138 23256489 ~ 23256834 (-) True G221960
XM_039790941.1 mRNA downstream 60708 22912562 ~ 22921256 (-) True LOC120552717
XM_039790272.1 mRNA downstream 93733 22841027 ~ 22888231 (-) False LOC120552328
XM_039790271.1 mRNA downstream 99667 22841027 ~ 22882297 (-) True LOC120552328
XM_039790664.1 mRNA downstream 180219 22697027 ~ 22801745 (-) False LOC120552530
XM_039790942.1 mRNA upstream 86369 23068720 ~ 23070897 (-) True LOC120552718
XM_039790844.1 mRNA upstream 146293 23128644 ~ 23308035 (-) False LOC120552656
XM_039790843.1 mRNA upstream 146293 23128644 ~ 23222054 (-) True LOC120552656
XM_039790845.1 mRNA upstream 146293 23128644 ~ 23220282 (-) False LOC120552656
XM_039790260.1 mRNA upstream 419192 23401543 ~ 23519526 (-) True LOC120552322
TU300141 other downstream 763598 22202783 ~ 22218366 (-) False smpx
TU300142 other downstream 764415 22202783 ~ 22217549 (-) True smpx
XR_005637957.1 other downstream 972876 21990017 ~ 22009088 (-) True tfr1b
TU299660 other downstream 2119299 20836297 ~ 20862665 (-) False LOC120552536
TU299133 other downstream 3655070 19315591 ~ 19326894 (-) True G221048
TU301970 other upstream 1981094 24963445 ~ 24967990 (-) False msl2b
TU302014 other upstream 2074242 25056593 ~ 25086708 (-) False LOC120552232
TU302146 other upstream 2574122 25556473 ~ 25562540 (-) True LOC120552299
TU302187 other upstream 2748405 25730756 ~ 25738884 (-) False LOC120552722
TU302229 other upstream 2845740 25828091 ~ 25834224 (-) False mynn

Expression Profile