RNA id: TU302113



Basic Information


Item Value
RNA id TU302113
length 293
lncRNA type inter_gene
GC content 0.46
exon number 2
gene id G223239
representative False

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 25658589 ~ 25721181 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTCACCTTTTTCAGTCAGTGTCACCTGGTGCTCCATCTCTTCGTATTTGGCGAGCTCCTTCACCAGTCGTAGTATATCAGACACGTCCCTGGGTTCAGCTTTTCGTAATTTATACTccattttcttcttttactctTTTTTCCTCTCGTTAGAAGTCCTCTGTATGTGAAGTGAAAGATTAGAAGTTTCTTCATTCGCTTCAGAGTGGCCTTTTCCCCACAGTCAGCCTCTGGTCCGGACGCGTTTGTTGAGACAAGATCATCCAGTAGTTATCACCCTCGGCTGGGTCGCTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU302169 lncRNA downstream 71805 25636454 ~ 25637238 (-) True G223270
TU302163 lncRNA downstream 104260 25604270 ~ 25604783 (-) True G223269
TU302157 lncRNA downstream 126839 25578299 ~ 25582204 (-) True G223265
XR_005637983.1 lncRNA downstream 146607 25556586 ~ 25562436 (-) False LOC120552299
TU302129 lncRNA downstream 167601 25471720 ~ 25541442 (-) True G223252
TU302112 lncRNA upstream 1219 25711820 ~ 25721181 (-) True G223239
TU302177 lncRNA upstream 11889 25722490 ~ 25725969 (-) True LOC120552722
TU302186 lncRNA upstream 29033 25739634 ~ 25742121 (-) True G223283
TU302192 lncRNA upstream 37878 25748479 ~ 25749713 (-) True G223288
TU302193 lncRNA upstream 37878 25748479 ~ 25749713 (-) False G223288
XM_039790602.1 mRNA downstream 2400 25684062 ~ 25706643 (-) False acot9.1
XM_039790601.1 mRNA downstream 2400 25684062 ~ 25706643 (-) True acot9.1
XM_039790603.1 mRNA downstream 5069 25684062 ~ 25703974 (-) False acot9.1
XM_039790600.1 mRNA downstream 25775 25669233 ~ 25683268 (-) False pdha1b
XM_039790946.1 mRNA upstream 14099 25724700 ~ 25738940 (-) False LOC120552722
XM_039790593.1 mRNA upstream 31976 25742577 ~ 25765312 (-) True klhl15
XM_039790610.1 mRNA upstream 86684 25797285 ~ 25812783 (-) False lrrc34
XM_039790607.1 mRNA upstream 90504 25801105 ~ 25812783 (-) False lrrc34
XM_039790605.1 mRNA upstream 90504 25801105 ~ 25812783 (-) False lrrc34
TU302146 other downstream 146503 25556473 ~ 25562540 (-) True LOC120552299
TU302014 other downstream 622335 25056593 ~ 25086708 (-) False LOC120552232
TU301970 other downstream 741053 24963445 ~ 24967990 (-) False msl2b
TU300141 other downstream 3490677 22202783 ~ 22218366 (-) False smpx
TU302187 other upstream 20155 25730756 ~ 25738884 (-) False LOC120552722
TU302229 other upstream 117490 25828091 ~ 25834224 (-) False mynn
TU302230 other upstream 117490 25828091 ~ 25833625 (-) False mynn
TU302261 other upstream 272993 25983594 ~ 25993497 (-) False G223331
TU302256 other upstream 331242 26041843 ~ 26042864 (-) False G223328

Expression Profile