RNA id: TU302229


Basic Information

Item Value
RNA id TU302229
length 824
RNA type TUCP
GC content 0.57
exon number 5
gene id mynn
representative False

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 25817429 ~ 25834224 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CGAGAACCCCCGACGTCACAGGATAATGGCTGAAGATCGCGGATATTAGAAGAGAAAGCTACAATTTAAGAGATAAAGAGGAGCTGGTGAAGCAGACACACTACTGACGctcTGACATTGGATTTCCACCAGAGATGGCTCATGTCACCAATCATGGGAAGCTGCTCTTGCAGCGCCTACATCAGCAGCGAGAGATGGACTTCTTGTGCGATATAACCATAATGGTGAGAGACGTGGAGTTCAGAGCCCACCGCAACATCCTGGCTGCGTTCAGCAAGTACTTCTCCGCCCAGGCTGAAAAGGGTCAAGATGTCACAACCTTGGACCCCGATAAGGTCAGCCGCTACGCTCTGGAGAAACTCCTGGAGTTCATCTACACCGGACAGATGAACCTCAGCAGTACCAGACAAGCGGCGGTGCGTCGAGCGGCGGTGTTCCTTGGGATGTCCGAGGCCACGAAGTTTCTGGAGGAAACGTCCCACTGGTCCGAGCTGAGCGAAACGTCCCAGTCCGAGGCCGATAAAGAAGCCGGTCTCTCTCCTTCCAGCCCGGCCTCTCCTGGCAGCGCCAGCTCTCCCGTCCCCCTGTCTATTGTCTCCGTTACGGGGGAGTACCAAGAGGACGGCCACGCTGGCGACAAGACGGGCGTCGAGCCCGGAGATGGAGACGcggaagagggagagaaaagcgACGGAGAGTACACCCCCGCTACGCCAAAGGGCATCGGAAGAGGACAGGGAAGGAAGAGAGGCCGACCGCCCAAGAGTTTGAGCGGCGAACAAATGGCGGAGCCGAGCAGCTCGGTTGACGGCACACCCAAAACC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU302228 lncRNA downstream 1245 25824362 ~ 25826846 (-) True G223305
TU302220 lncRNA downstream 27398 25799721 ~ 25800693 (-) True G223301
TU302179 lncRNA downstream 57948 25700797 ~ 25770143 (-) True G223277
TU302192 lncRNA downstream 78378 25748479 ~ 25749713 (-) True G223288
TU302193 lncRNA downstream 78378 25748479 ~ 25749713 (-) False G223288
TU302240 lncRNA upstream 81033 25915257 ~ 25915749 (-) True G223314
TU302244 lncRNA upstream 94415 25928639 ~ 25930103 (-) True G223318
TU302246 lncRNA upstream 98773 25932997 ~ 25935547 (-) True G223320
TU302245 lncRNA upstream 103569 25937793 ~ 25939788 (-) True G223319
TU302248 lncRNA upstream 122063 25956287 ~ 25956599 (-) True G223322
XM_039790610.1 mRNA downstream 15308 25797285 ~ 25812783 (-) False lrrc34
XM_039790607.1 mRNA downstream 15308 25801105 ~ 25812783 (-) False lrrc34
XM_039790605.1 mRNA downstream 15308 25801105 ~ 25812783 (-) False lrrc34
XM_039790604.1 mRNA downstream 15308 25801105 ~ 25812783 (-) True lrrc34
XM_039790608.1 mRNA downstream 16272 25801105 ~ 25811819 (-) False lrrc34
XM_039790611.1 mRNA upstream 266664 26100888 ~ 26110027 (-) True cldn11b
XM_039790127.1 mRNA upstream 276183 26110407 ~ 26148023 (-) True si:ch211-230g15.5
XM_039790129.1 mRNA upstream 276183 26110407 ~ 26148020 (-) False si:ch211-230g15.5
XM_039790128.1 mRNA upstream 276183 26110407 ~ 26147104 (-) False si:ch211-230g15.5
XM_039790716.1 mRNA upstream 489269 26323493 ~ 26345733 (-) True rmc1
TU302187 other downstream 89207 25730756 ~ 25738884 (-) False LOC120552722
TU302146 other downstream 265551 25556473 ~ 25562540 (-) True LOC120552299
TU302014 other downstream 741383 25056593 ~ 25086708 (-) False LOC120552232
TU301970 other downstream 860101 24963445 ~ 24967990 (-) False msl2b
TU300141 other downstream 3609725 22202783 ~ 22218366 (-) False smpx
TU302261 other upstream 149370 25983594 ~ 25993497 (-) False G223331
TU302256 other upstream 207619 26041843 ~ 26042864 (-) False G223328
TU302257 other upstream 207619 26041843 ~ 26042864 (-) True G223328
TU302290 other upstream 220295 26054519 ~ 26059062 (-) True G223351
TU302289 other upstream 225773 26059997 ~ 26130122 (-) True G223350

Expression Profile