RNA id: TU302320



Basic Information


Item Value
RNA id TU302320
length 246
lncRNA type intronic
GC content 0.49
exon number 2
gene id G223371
representative True

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 26106712 ~ 26106987 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTAaagtgttttctctctctctctctgtctgtctctctctctctgtctgtctctctctctctctctctgtctgtctgtctgtctgtctctctctctctctgtctgtctgtctgtctgtctgtctgtctgtctgtctctctctctctctctctgtgtgtgtctctctctctctctctctctctctctctctctgtctgtctgtctgtctgtctctctctctgtctgtctgtctgtctgtctgtctct

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU302282 lncRNA downstream 20032 26026105 ~ 26086680 (-) True G223348
TU302310 lncRNA downstream 32770 26071089 ~ 26073942 (-) True G223363
TU302255 lncRNA downstream 63848 25981460 ~ 26042864 (-) False G223328
TU302295 lncRNA downstream 70911 26035415 ~ 26035801 (-) True G223354
TU302281 lncRNA downstream 83217 26022960 ~ 26023495 (-) True G223347
TU302421 lncRNA upstream 326322 26433309 ~ 26464216 (-) False G223449
TU302422 lncRNA upstream 326322 26433309 ~ 26464216 (-) False G223449
TU302423 lncRNA upstream 326322 26433309 ~ 26476967 (-) False G223449
TU302429 lncRNA upstream 354339 26461326 ~ 26463045 (-) True G223455
TU302417 lncRNA upstream 356306 26463293 ~ 26464216 (-) True G223449
XM_039790947.1 mRNA downstream 272772 25817429 ~ 25833940 (-) True mynn
XM_039790605.1 mRNA downstream 293929 25801105 ~ 25812783 (-) False lrrc34
XM_039790127.1 mRNA upstream 3420 26110407 ~ 26148023 (-) True si:ch211-230g15.5
XM_039790129.1 mRNA upstream 3420 26110407 ~ 26148020 (-) False si:ch211-230g15.5
XM_039790128.1 mRNA upstream 3420 26110407 ~ 26147104 (-) False si:ch211-230g15.5
XM_039790716.1 mRNA upstream 216506 26323493 ~ 26345733 (-) True rmc1
XM_039790717.1 mRNA upstream 245644 26352631 ~ 26375762 (-) True riok3
TU302290 other downstream 47650 26054519 ~ 26059062 (-) True G223351
TU302256 other downstream 63848 26041843 ~ 26042864 (-) False G223328
TU302257 other downstream 63848 26041843 ~ 26042864 (-) True G223328
TU302261 other downstream 113215 25983594 ~ 25993497 (-) False G223331
TU302230 other downstream 273087 25828091 ~ 25833625 (-) False mynn
TU302346 other upstream 109898 26216885 ~ 26218324 (-) True G223395
TU302395 other upstream 297014 26404001 ~ 26409357 (-) True G223433
unassigned_transcript_1419 other upstream 340699 26447686 ~ 26447759 (-) True trnai-aau_30
unassigned_transcript_1420 other upstream 342856 26449843 ~ 26449916 (-) True trnai-aau_31
unassigned_transcript_1421 other upstream 359450 26466437 ~ 26466510 (-) True trnai-aau_32

Expression Profile