RNA id: TU302420



Basic Information


Item Value
RNA id TU302420
length 271
lncRNA type sense_over
GC content 0.43
exon number 3
gene id G223449
representative False

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 26433309 ~ 26494229 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


acagatacacacacacacacacacacacagacacacagagacacacacacagacacacagagacacacacacagacacacacagagacacacacacacacacagagacacacacacagacacacagagacacacacacacagacacacagagacacacacacacagacacacacatacaaagacacacacacacagagacacacaaagacacacacattattttatttttttattatcaaataacatacagtatgtcccaTCCCATAATGC

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU302429 lncRNA downstream 248 26461326 ~ 26463045 (-) True G223455
TU302320 lncRNA downstream 356306 26106712 ~ 26106987 (-) True G223371
TU302282 lncRNA downstream 376613 26026105 ~ 26086680 (-) True G223348
TU302454 lncRNA upstream 60624 26554853 ~ 26558519 (-) True G223464
TU302465 lncRNA upstream 98812 26593041 ~ 26658273 (-) True G223471
TU302453 lncRNA upstream 106994 26601223 ~ 26656318 (-) True G223463
TU302458 lncRNA upstream 117028 26611257 ~ 26629018 (-) False G223466
TU302446 lncRNA upstream 120175 26614404 ~ 26631568 (-) False G223462
XM_039790717.1 mRNA downstream 87531 26352631 ~ 26375762 (-) True riok3
XM_039790716.1 mRNA downstream 117560 26323493 ~ 26345733 (-) True rmc1
XM_039790127.1 mRNA downstream 315270 26110407 ~ 26148023 (-) True si:ch211-230g15.5
XM_039790961.1 mRNA upstream 65206 26559435 ~ 26906332 (-) True LOC120552733
XM_039790722.1 mRNA upstream 451221 26945450 ~ 26968414 (-) True ssr1
XM_039790724.1 mRNA upstream 451221 26945450 ~ 26968413 (-) False ssr1
XM_039790727.1 mRNA upstream 478618 26972847 ~ 26980874 (-) False LOC120552563
XM_039790728.1 mRNA upstream 478618 26972847 ~ 26980874 (-) False LOC120552563
unassigned_transcript_1420 other downstream 13377 26449843 ~ 26449916 (-) True trnai-aau_31
unassigned_transcript_1419 other downstream 15534 26447686 ~ 26447759 (-) True trnai-aau_30
TU302395 other downstream 53936 26404001 ~ 26409357 (-) True G223433
TU302346 other downstream 244969 26216885 ~ 26218324 (-) True G223395
TU302289 other downstream 333171 26059997 ~ 26130122 (-) True G223350
TU302546 other upstream 610369 27104598 ~ 27188218 (-) True G223516
TU302573 other upstream 983037 27477266 ~ 27483161 (-) True G223538
TU302721 other upstream 1146335 27640564 ~ 27685979 (-) False G223640
TU302729 other upstream 1185186 27679415 ~ 27685979 (-) True G223640
TU302745 other upstream 1200625 27694854 ~ 27700381 (-) False LOC120552596

Expression Profile