RNA id: TU302458


Basic Information

Item Value
RNA id TU302458
length 355
lncRNA type sense_over
GC content 0.49
exon number 3
gene id G223466
representative False

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 26611257 ~ 26629018 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtctgtgtgtgtgtgtgtgtgtgtctctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtctctctgtgtgtctatgtgtctgtgtttgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtctctgtgtgtgtgtgtgtttgtgtgtgtctctgtgtctgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggtgtgtg

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU302454 lncRNA downstream 52738 26554853 ~ 26558519 (-) True G223464
TU302420 lncRNA downstream 117028 26463293 ~ 26494229 (-) False G223449
TU302400 lncRNA downstream 140462 26468422 ~ 26470795 (-) True G223436
TU302401 lncRNA downstream 140462 26468422 ~ 26470795 (-) False G223436
TU302417 lncRNA downstream 147041 26463293 ~ 26464216 (-) True G223449
TU302452 lncRNA upstream 2031 26631049 ~ 26631568 (-) True G223462
TU302488 lncRNA upstream 8645 26637663 ~ 26638261 (-) True G223481
TU302491 lncRNA upstream 23635 26652653 ~ 26653349 (-) True G223482
TU302492 lncRNA upstream 29911 26658929 ~ 26681370 (-) True G223483
TU302497 lncRNA upstream 47829 26676847 ~ 26718815 (-) True G223487
XM_039790721.1 mRNA downstream 108530 26483929 ~ 26502727 (-) False LOC120552560
XM_039790720.1 mRNA downstream 108530 26483929 ~ 26502727 (-) False LOC120552560
XM_039790719.1 mRNA downstream 108530 26483929 ~ 26502727 (-) False LOC120552560
XM_039790717.1 mRNA downstream 235495 26352631 ~ 26375762 (-) True riok3
XM_039790716.1 mRNA downstream 265524 26323493 ~ 26345733 (-) True rmc1
XM_039790722.1 mRNA upstream 316432 26945450 ~ 26968414 (-) True ssr1
XM_039790724.1 mRNA upstream 316432 26945450 ~ 26968413 (-) False ssr1
XM_039790727.1 mRNA upstream 343829 26972847 ~ 26980874 (-) False LOC120552563
XM_039790728.1 mRNA upstream 343829 26972847 ~ 26980874 (-) False LOC120552563
XM_039790726.1 mRNA upstream 343829 26972847 ~ 26980874 (-) False LOC120552563
TU302432 other downstream 101130 26484235 ~ 26510127 (-) False LOC120552560
TU302433 other downstream 101130 26484235 ~ 26510127 (-) False LOC120552560
TU302435 other downstream 108104 26484235 ~ 26503153 (-) True LOC120552560
TU302399 other downstream 135346 26471704 ~ 26475911 (-) True G223435
unassigned_transcript_1423 other downstream 143425 26467759 ~ 26467832 (-) True trnai-aau_34
TU302546 other upstream 475580 27104598 ~ 27188218 (-) True G223516
TU302573 other upstream 848248 27477266 ~ 27483161 (-) True G223538
TU302721 other upstream 1011546 27640564 ~ 27685979 (-) False G223640
TU302729 other upstream 1050397 27679415 ~ 27685979 (-) True G223640
TU302745 other upstream 1065836 27694854 ~ 27700381 (-) False LOC120552596

Expression Profile