RNA id: TU302548


Basic Information

Item Value
RNA id TU302548
length 296
lncRNA type read_through
GC content 0.50
exon number 2
gene id G223518
representative True

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27005323 ~ 27059504 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtgtgtctgtgtgtgtgtgtgtctgtctgtgtgtctgtgtctgtgtgtgtgtgtgtgtttgtctgtgtgtctgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtctgtgtgtctgtctgtgtgtgtgtgtgtgtctgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtgtgtgtgtgtgtgtgtgtgtgtctgtgtctgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtctgtgt

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU302533 lncRNA downstream 13573 26982784 ~ 26991750 (-) True G223515
TU302535 lncRNA downstream 13573 26982784 ~ 26991750 (-) False G223515
TU302538 lncRNA downstream 13816 26982784 ~ 26991507 (-) False G223515
TU302542 lncRNA downstream 13816 26982784 ~ 26991507 (-) False G223515
TU302552 lncRNA downstream 28029 26976478 ~ 26977294 (-) True G223522
TU302564 lncRNA upstream 28229 27087733 ~ 27088197 (-) True G223534
TU302571 lncRNA upstream 98469 27157973 ~ 27483161 (-) False G223538
TU302593 lncRNA upstream 193994 27253498 ~ 27254197 (-) True G223552
TU302592 lncRNA upstream 196356 27255860 ~ 27264163 (-) True G223551
TU302595 lncRNA upstream 207744 27267248 ~ 27267746 (-) True G223554
XM_039790727.1 mRNA downstream 24449 26972847 ~ 26980874 (-) False LOC120552563
XM_039790728.1 mRNA downstream 24449 26972847 ~ 26980874 (-) False LOC120552563
XM_039790726.1 mRNA downstream 24449 26972847 ~ 26980874 (-) False LOC120552563
XM_039790725.1 mRNA downstream 24449 26972847 ~ 26980874 (-) True LOC120552563
XM_039790729.1 mRNA downstream 24888 26972847 ~ 26980435 (-) False LOC120552563
XM_039790963.1 mRNA upstream 77267 27136771 ~ 27189544 (-) True LOC120552735
XM_039790757.1 mRNA upstream 135826 27195330 ~ 27205153 (-) False LOC120552579
XM_039790756.1 mRNA upstream 139897 27199401 ~ 27205153 (-) True LOC120552579
XM_039790772.1 mRNA upstream 164250 27223754 ~ 27224992 (-) True LOC120552591
XM_039790742.1 mRNA upstream 198869 27258373 ~ 28497020 (-) False LOC120552569
TU302432 other downstream 495196 26484235 ~ 26510127 (-) False LOC120552560
TU302433 other downstream 495196 26484235 ~ 26510127 (-) False LOC120552560
TU302435 other downstream 502170 26484235 ~ 26503153 (-) True LOC120552560
TU302399 other downstream 529412 26471704 ~ 26475911 (-) True G223435
unassigned_transcript_1423 other downstream 537491 26467759 ~ 26467832 (-) True trnai-aau_34
TU302546 other upstream 45094 27104598 ~ 27188218 (-) True G223516
TU302573 other upstream 417762 27477266 ~ 27483161 (-) True G223538
TU302721 other upstream 581060 27640564 ~ 27685979 (-) False G223640
TU302729 other upstream 619911 27679415 ~ 27685979 (-) True G223640
TU302745 other upstream 635350 27694854 ~ 27700381 (-) False LOC120552596

Expression Profile