RNA id: TU302595



Basic Information


Item Value
RNA id TU302595
length 236
lncRNA type intronic
GC content 0.45
exon number 2
gene id G223554
representative True

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27267248 ~ 27267746 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


agtcaaagccctaacacacacacacacacacacacacatagagacgcactcacacacacatagagacacactcacacacacacacatagagacacacacacacaaacatacacacacacacacacacacacacacacaggtatcacCTGTTGTTGGTGACAGATCAGACTAAAGAGACTTCAAACATCTGCATTTGGAAACATGCTTCACTCTCTGTGCTcctttaacgtgtgtgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU302592 lncRNA downstream 3085 27255860 ~ 27264163 (-) True G223551
TU302593 lncRNA downstream 13051 27253498 ~ 27254197 (-) True G223552
TU302547 lncRNA downstream 119241 27044837 ~ 27148007 (-) True G223517
TU302564 lncRNA downstream 179051 27087733 ~ 27088197 (-) True G223534
TU302548 lncRNA downstream 207744 27005323 ~ 27059504 (-) True G223518
TU302596 lncRNA upstream 7545 27275291 ~ 27277548 (-) True G223555
TU302603 lncRNA upstream 8002 27275748 ~ 27299292 (-) True G223559
TU302608 lncRNA upstream 33130 27300876 ~ 27301518 (-) True G223563
TU302628 lncRNA upstream 92076 27359822 ~ 27364272 (-) True G223578
TU302638 lncRNA upstream 92728 27360474 ~ 27365071 (-) False G223579
XM_039790772.1 mRNA downstream 42256 27223754 ~ 27224992 (-) True LOC120552591
XM_039790757.1 mRNA downstream 62095 27195330 ~ 27205153 (-) False LOC120552579
XM_039790756.1 mRNA downstream 62095 27199401 ~ 27205153 (-) True LOC120552579
XM_039790963.1 mRNA downstream 77704 27136771 ~ 27189544 (-) True LOC120552735
XM_039790962.1 mRNA downstream 137854 27046827 ~ 27129394 (-) True LOC120552734
XM_039790775.1 mRNA upstream 42266 27310012 ~ 27312365 (-) True LOC120552593
XM_039790740.1 mRNA upstream 222423 27490169 ~ 27514926 (-) True LOC120552569
XM_039790739.1 mRNA upstream 222423 27490169 ~ 27513827 (-) False LOC120552569
XM_039790741.1 mRNA upstream 222423 27490169 ~ 27504190 (-) False LOC120552569
XM_039790786.1 mRNA upstream 248220 27515966 ~ 27625569 (-) True rreb1a
TU302546 other downstream 79030 27104598 ~ 27188218 (-) True G223516
TU302432 other downstream 757121 26484235 ~ 26510127 (-) False LOC120552560
TU302433 other downstream 757121 26484235 ~ 26510127 (-) False LOC120552560
TU302435 other downstream 764095 26484235 ~ 26503153 (-) True LOC120552560
TU302399 other downstream 791337 26471704 ~ 26475911 (-) True G223435
TU302573 other upstream 209520 27477266 ~ 27483161 (-) True G223538
TU302721 other upstream 372818 27640564 ~ 27685979 (-) False G223640
TU302729 other upstream 411669 27679415 ~ 27685979 (-) True G223640
TU302745 other upstream 427108 27694854 ~ 27700381 (-) False LOC120552596
TU302749 other upstream 471036 27738782 ~ 27739972 (-) True G223645

Expression Profile