RNA id: TU302637



Basic Information


Item Value
RNA id TU302637
length 268
lncRNA type intronic
GC content 0.45
exon number 2
gene id G223579
representative False

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27360474 ~ 27365071 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tgtgtgtgtgtgtgtatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtctatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctatatgtgtgtgtgtgtgtctatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctatatgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatatgtgtgtgtg

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU302628 lncRNA downstream 423 27359822 ~ 27364272 (-) True G223578
TU302608 lncRNA downstream 63177 27300876 ~ 27301518 (-) True G223563
TU302603 lncRNA downstream 65403 27275748 ~ 27299292 (-) True G223559
TU302596 lncRNA downstream 87147 27275291 ~ 27277548 (-) True G223555
TU302595 lncRNA downstream 96949 27267248 ~ 27267746 (-) True G223554
TU302645 lncRNA upstream 57347 27422418 ~ 27438870 (-) True G223585
TU302648 lncRNA upstream 59658 27424729 ~ 27451993 (-) True G223587
TU302568 lncRNA upstream 112195 27477266 ~ 27483161 (-) False G223538
TU302572 lncRNA upstream 112195 27477266 ~ 27483161 (-) False G223538
TU302574 lncRNA upstream 112195 27477266 ~ 27483161 (-) False G223538
XM_039790775.1 mRNA downstream 52330 27310012 ~ 27312365 (-) True LOC120552593
XM_039790772.1 mRNA downstream 139703 27223754 ~ 27224992 (-) True LOC120552591
XM_039790757.1 mRNA downstream 159542 27195330 ~ 27205153 (-) False LOC120552579
XM_039790756.1 mRNA downstream 159542 27199401 ~ 27205153 (-) True LOC120552579
XM_039790963.1 mRNA downstream 175151 27136771 ~ 27189544 (-) True LOC120552735
XM_039790740.1 mRNA upstream 125098 27490169 ~ 27514926 (-) True LOC120552569
XM_039790739.1 mRNA upstream 125098 27490169 ~ 27513827 (-) False LOC120552569
XM_039790741.1 mRNA upstream 125098 27490169 ~ 27504190 (-) False LOC120552569
XM_039790786.1 mRNA upstream 150895 27515966 ~ 27625569 (-) True rreb1a
XM_039790778.1 mRNA upstream 329269 27694340 ~ 27700331 (-) False LOC120552596
TU302546 other downstream 176477 27104598 ~ 27188218 (-) True G223516
TU302432 other downstream 854568 26484235 ~ 26510127 (-) False LOC120552560
TU302433 other downstream 854568 26484235 ~ 26510127 (-) False LOC120552560
TU302435 other downstream 861542 26484235 ~ 26503153 (-) True LOC120552560
TU302399 other downstream 888784 26471704 ~ 26475911 (-) True G223435
TU302573 other upstream 112195 27477266 ~ 27483161 (-) True G223538
TU302721 other upstream 275493 27640564 ~ 27685979 (-) False G223640
TU302729 other upstream 314344 27679415 ~ 27685979 (-) True G223640
TU302745 other upstream 329783 27694854 ~ 27700381 (-) False LOC120552596
TU302749 other upstream 373711 27738782 ~ 27739972 (-) True G223645

Expression Profile