RNA id: TU302882



Basic Information


Item Value
RNA id TU302882
length 209
lncRNA type read_through
GC content 0.44
exon number 3
gene id LOC120552569
representative False

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27258373 ~ 28498012 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AGAGAACAGAGTAGGAGGTGGAAACTGAAGGCTGAGGCAGGGTGAATCTGTGAAAAAACACCTCATCTGAGTTGTTCTACGTCGCCATTTTGGACTGTTTGaagaaactAAAGAATATGAAGAATATacaacacaaaccacacaacAGTTAACTGAAGTGAGACCAGAAGAGATCAGGAGGAGGAAACTGAAGGCTGAGGCAGGGTGAG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU302919 lncRNA downstream 34067 28176365 ~ 28195245 (-) False G223746
TU302920 lncRNA downstream 34381 28194528 ~ 28194931 (-) False G223746
TU302921 lncRNA downstream 42674 28178570 ~ 28186638 (-) True G223747
TU302914 lncRNA downstream 42893 28120835 ~ 28186419 (-) True G223743
TU302883 lncRNA downstream 47203 28179702 ~ 28182109 (-) True G223714
TU302951 lncRNA upstream 4084 28502096 ~ 28595855 (-) False G223764
TU302952 lncRNA upstream 4084 28502096 ~ 28502413 (-) True G223764
TU302970 lncRNA upstream 87787 28585799 ~ 28617807 (-) False G223770
TU302968 lncRNA upstream 89386 28587398 ~ 28617807 (-) False G223770
TU302963 lncRNA upstream 89469 28587481 ~ 28621566 (-) False G223770
XM_039790778.1 mRNA downstream 528981 27694340 ~ 27700331 (-) False LOC120552596
XM_039790779.1 mRNA downstream 528981 27694340 ~ 27700331 (-) False LOC120552596
XM_039790780.1 mRNA downstream 528981 27694340 ~ 27700331 (-) True LOC120552596
XM_039790781.1 mRNA downstream 528981 27694540 ~ 27700331 (-) False LOC120552596
XM_039790783.1 mRNA downstream 528981 27695838 ~ 27700331 (-) False LOC120552596
XM_039790735.1 mRNA upstream 283878 28781890 ~ 28846252 (-) True LOC120552566
XM_039790785.1 mRNA upstream 432219 28930231 ~ 29094205 (-) True dnah5l
XM_039790743.1 mRNA upstream 627202 29125214 ~ 29147661 (-) True LOC120552571
XM_039790744.1 mRNA upstream 627202 29125214 ~ 29147658 (-) False LOC120552571
XM_039790769.1 mRNA upstream 653422 29151434 ~ 29161971 (-) True LOC120552587
TU302917 other downstream 33887 28194528 ~ 28195425 (-) True G223746
TU302918 other downstream 33887 28194528 ~ 28195425 (-) False G223746
TU302806 other downstream 313479 27897498 ~ 27915833 (-) False G223681
TU302801 other downstream 313479 27914603 ~ 27915833 (-) True G223681
TU302751 other downstream 433461 27756346 ~ 27795851 (-) False G223646
XR_005638031.1 other upstream 302487 28800499 ~ 28846253 (-) False LOC120552566
TU303066 other upstream 802678 29300690 ~ 29305614 (-) False LOC120552583
TU303131 other upstream 981797 29479809 ~ 29543351 (-) False LOC120552608
TU303133 other upstream 982606 29480618 ~ 29490705 (-) False LOC120552608
TU303182 other upstream 1052383 29550395 ~ 29563368 (-) True G223911

Expression Profile