RNA id: TU302674



Basic Information


Item Value
RNA id TU302674
length 260
lncRNA type read_through
GC content 0.50
exon number 3
gene id G223608
representative True

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27528400 ~ 27584765 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


cacacacacacacaaacacacacacacacagacacacacacacagagacacacacacacacacacacagacacacacacacacacacacagagacacacacacacacacacacagagacagagagagacacacacacacacacacacacacacgcacacacagagacacacacacacacacacacacacacacacagagagacagagagacacacacacacacacacacacacacacacagacagagagacacacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU302666 lncRNA downstream 2961 27524583 ~ 27525439 (-) False rreb1a
TU302664 lncRNA downstream 7418 27516861 ~ 27520982 (-) False rreb1a
TU302663 lncRNA downstream 12022 27515960 ~ 27516378 (-) False rreb1a
TU302669 lncRNA downstream 14588 27511954 ~ 27513812 (-) False LOC120552569
TU302572 lncRNA downstream 45239 27477266 ~ 27483161 (-) False G223538
TU302705 lncRNA upstream 13376 27598141 ~ 27655408 (-) True G223627
TU302711 lncRNA upstream 18758 27603523 ~ 27603888 (-) True G223633
TU302704 lncRNA upstream 47930 27632695 ~ 27719691 (-) False G223626
TU302736 lncRNA upstream 60309 27645074 ~ 27645453 (-) False G223640
TU302743 lncRNA upstream 88800 27673565 ~ 27738562 (-) True G223643
XM_039790740.1 mRNA downstream 13474 27490169 ~ 27514926 (-) True LOC120552569
XM_039790739.1 mRNA downstream 14573 27490169 ~ 27513827 (-) False LOC120552569
XM_039790741.1 mRNA downstream 24210 27490169 ~ 27504190 (-) False LOC120552569
XM_039790775.1 mRNA downstream 216035 27310012 ~ 27312365 (-) True LOC120552593
XM_039790772.1 mRNA downstream 303408 27223754 ~ 27224992 (-) True LOC120552591
XM_039790778.1 mRNA upstream 109575 27694340 ~ 27700331 (-) False LOC120552596
XM_039790779.1 mRNA upstream 109575 27694340 ~ 27700331 (-) False LOC120552596
XM_039790780.1 mRNA upstream 109575 27694340 ~ 27700331 (-) True LOC120552596
XM_039790781.1 mRNA upstream 109775 27694540 ~ 27700331 (-) False LOC120552596
XM_039790783.1 mRNA upstream 111073 27695838 ~ 27700331 (-) False LOC120552596
TU302573 other downstream 45239 27477266 ~ 27483161 (-) True G223538
TU302546 other downstream 340182 27104598 ~ 27188218 (-) True G223516
TU302432 other downstream 1018273 26484235 ~ 26510127 (-) False LOC120552560
TU302721 other upstream 55799 27640564 ~ 27685979 (-) False G223640
TU302729 other upstream 94650 27679415 ~ 27685979 (-) True G223640
TU302745 other upstream 110089 27694854 ~ 27700381 (-) False LOC120552596
TU302749 other upstream 154017 27738782 ~ 27739972 (-) True G223645
TU302775 other upstream 165940 27750705 ~ 27754334 (-) True G223665

Expression Profile