RNA id: TU302704



Basic Information


Item Value
RNA id TU302704
length 787
lncRNA type read_through
GC content 0.42
exon number 4
gene id G223626
representative False

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27632695 ~ 27719691 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TCAGACACATTTTGAACAAATCAAAGCTTTTAAAACAAACAGTGAGAAGCCATTAATGTAGTTCCATGACAGAAGGACATCTGGAGATTAGTTATGAAACTCCATAAATGTTCCTTTAGGACACAATCAGTGTCTGATGTTGACAAATAAAAGGTCTGTTAGCTGCTGAATGCAGATTTAAAAACTCATTCACAAACATAGAAAACAGACACAACAAATTATACATCCTCTGCACTTGTACACGATTTTCAAAAAGATTTCACTCAACAATCTAAAATGTCATCAGCGTACATGACTTCATTGACAAAATGCCACGCGATTGGTTGGTTTAAAAACGGCAGGAAATGCATCTCGGGTATCCTATCGCGAGAGTCCGTGATCCCTTAAGAAGATGTTTTTAATCCACTGGTCAGATCAGCTGTTGGTCCGCTGTAGTTGATGATGTCAcagctgggtgtgtgtgtgtgtgtgtgtgtgtgtatgtatgtatgtgtgtgtgagatgatgTCAcagctgggtgtgtgtgtatgttgttctcaaagctgtgtgtctgtgtgtgtgatgatgtcacagctgtgtgtgtgtttgttgttctcaaagctgtgtctgtgtgtgtgtgagatgatgtcacagctgtgtgtgtgtgtgtgtgtgtgagatgatgtcacagctgtgttgtgtgtgtgacgtcaaagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgggggtgtgtgtgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU302711 lncRNA downstream 28807 27603523 ~ 27603888 (-) True G223633
TU302675 lncRNA downstream 40230 27532743 ~ 27592465 (-) True G223609
TU302676 lncRNA downstream 40230 27561874 ~ 27592465 (-) False G223609
TU302673 lncRNA downstream 47181 27562805 ~ 27585514 (-) False G223607
TU302674 lncRNA downstream 47930 27528400 ~ 27584765 (-) True G223608
TU302772 lncRNA upstream 54250 27773941 ~ 27779917 (-) False G223664
TU302773 lncRNA upstream 54250 27773941 ~ 27865723 (-) True G223664
TU302758 lncRNA upstream 75122 27794813 ~ 27841026 (-) True G223651
TU302783 lncRNA upstream 93606 27813297 ~ 27813730 (-) True G223671
TU302784 lncRNA upstream 93606 27813297 ~ 27861633 (-) False G223671
XM_039790786.1 mRNA downstream 7126 27515966 ~ 27625569 (-) True rreb1a
XM_039790740.1 mRNA downstream 117769 27490169 ~ 27514926 (-) True LOC120552569
XM_039790739.1 mRNA downstream 118868 27490169 ~ 27513827 (-) False LOC120552569
XM_039790741.1 mRNA downstream 128505 27490169 ~ 27504190 (-) False LOC120552569
XM_039790775.1 mRNA downstream 320330 27310012 ~ 27312365 (-) True LOC120552593
XM_039790736.1 mRNA upstream 583643 28303334 ~ 28355647 (-) True LOC120552567
XM_039790787.1 mRNA upstream 657388 28377079 ~ 29112293 (-) True LOC120552600
XM_039790735.1 mRNA upstream 1062199 28781890 ~ 28846252 (-) True LOC120552566
XM_039790785.1 mRNA upstream 1210540 28930231 ~ 29094205 (-) True dnah5l
XM_039790743.1 mRNA upstream 1405523 29125214 ~ 29147661 (-) True LOC120552571
TU302573 other downstream 149534 27477266 ~ 27483161 (-) True G223538
TU302546 other downstream 444477 27104598 ~ 27188218 (-) True G223516
TU302432 other downstream 1122568 26484235 ~ 26510127 (-) False LOC120552560
TU302749 other upstream 19091 27738782 ~ 27739972 (-) True G223645
TU302775 other upstream 31014 27750705 ~ 27754334 (-) True G223665
TU302776 other upstream 31014 27750705 ~ 27753356 (-) False G223665
TU302750 other upstream 36655 27756346 ~ 27795851 (-) True G223646
TU302751 other upstream 36655 27756346 ~ 27795851 (-) False G223646

Expression Profile