RNA id: TU302745



Basic Information


Item Value
RNA id TU302745
length 685
RNA type TUCP
GC content 0.46
exon number 5
gene id LOC120552596
representative False

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27694340 ~ 27700381 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AATTGAAGCAGAGTGAGACTTctcatttcctctttctttaACTATCTTTGGCTACAACGactatttgttttattgttttccaAGTTTAACGTTATTTCATTTAATTATGTCTTTACTGTAACGACTGACACGGCACAAAGCTGTCCCTCAGAATATAACTGCTTTCCCGGTCTAATGTAAGTGTAAATATAACGCCTGTGACCTAAATATCAGTATAAAAACGGAAAAATACGGATTTAGCGCTCgctaggctaatgttagcttcttGTTAGCTTGTTTTAGCTAACTGGCGCAGCCATACCAAGAGgatgAGTGGAGgagtccagcagcagcagttgtaTTTCCTGGGCCTCCCAGACCTGAAGAAGCTGTGCTGTGTGACTATGGCCCTGCCAGAGGACCAGGAGCTGAGGAGCAGACAGATCAAGACCTGCAGAGAGCTGATTTTGCTGTACTCTGATATTGTGGCCTCTCCAGCTCTGGACTCCTTGAGTGAAATCACAGTGGTCATGGccATGTCGTATTTCCAGAAAGGCATCGTTCAGATGTTTGCCCAGAGACGCAGTCTGCAGcTGAGCTcctctcagtgtgtgtttccAGGTGTCCTCCAGTATTGTGTGTCCTTCTCTCTGATCACCAGACTGGCTCCCAGCTGGAACAAAGCAGGACTCTACCTCATCGCTGG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU302720 lncRNA downstream 8875 27684390 ~ 27685979 (-) False G223640
TU302738 lncRNA downstream 8875 27684390 ~ 27685979 (-) False G223640
TU302740 lncRNA downstream 8875 27684627 ~ 27685979 (-) False G223640
TU302705 lncRNA downstream 39446 27598141 ~ 27655408 (-) True G223627
TU302736 lncRNA downstream 49401 27645074 ~ 27645453 (-) False G223640
TU302755 lncRNA upstream 2232 27702613 ~ 27802788 (-) True G223648
TU302701 lncRNA upstream 14545 27714926 ~ 27719691 (-) True G223626
TU302772 lncRNA upstream 73560 27773941 ~ 27779917 (-) False G223664
TU302773 lncRNA upstream 73560 27773941 ~ 27865723 (-) True G223664
TU302758 lncRNA upstream 94432 27794813 ~ 27841026 (-) True G223651
XM_039790786.1 mRNA downstream 69285 27515966 ~ 27625569 (-) True rreb1a
XM_039790740.1 mRNA downstream 179928 27490169 ~ 27514926 (-) True LOC120552569
XM_039790739.1 mRNA downstream 181027 27490169 ~ 27513827 (-) False LOC120552569
XM_039790741.1 mRNA downstream 190664 27490169 ~ 27504190 (-) False LOC120552569
XM_039790775.1 mRNA downstream 382489 27310012 ~ 27312365 (-) True LOC120552593
XM_039790736.1 mRNA upstream 602953 28303334 ~ 28355647 (-) True LOC120552567
XM_039790787.1 mRNA upstream 676698 28377079 ~ 29112293 (-) True LOC120552600
XM_039790735.1 mRNA upstream 1081509 28781890 ~ 28846252 (-) True LOC120552566
XM_039790785.1 mRNA upstream 1229850 28930231 ~ 29094205 (-) True dnah5l
XM_039790743.1 mRNA upstream 1424833 29125214 ~ 29147661 (-) True LOC120552571
TU302721 other downstream 8875 27640564 ~ 27685979 (-) False G223640
TU302729 other downstream 8875 27679415 ~ 27685979 (-) True G223640
TU302573 other downstream 211693 27477266 ~ 27483161 (-) True G223538
TU302546 other downstream 506636 27104598 ~ 27188218 (-) True G223516
TU302432 other downstream 1184727 26484235 ~ 26510127 (-) False LOC120552560
TU302749 other upstream 38401 27738782 ~ 27739972 (-) True G223645
TU302775 other upstream 50324 27750705 ~ 27754334 (-) True G223665
TU302776 other upstream 50324 27750705 ~ 27753356 (-) False G223665
TU302750 other upstream 55965 27756346 ~ 27795851 (-) True G223646
TU302751 other upstream 55965 27756346 ~ 27795851 (-) False G223646

Expression Profile