RNA id: TU302750


Basic Information

Item Value
RNA id TU302750
length 633
RNA type TUCP
GC content 0.62
exon number 4
gene id G223646
representative True

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 27756346 ~ 27795851 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GCCGACTGGACTGCAGCTCAACGCTGGAGTGTGACAGAAGGCCTCCTGATCTaacccaccaccccccccctcaTCGATCCCTTCCTCCTCCGTGTTCAAAGCTGCGGAAGAATCGGTCTGGGACACATCAGCCCGTGACCCGAACCTGATCGCCCACCAACCCGTTCATCCAGCCGGTCCCCTTCTCTCTGGATCAGCAAACTCTGCTGCACCGTTCGATCCACAGACTgaaCTCCATGGACCAATCATCATGAGACTAATCTCCATCCCCGTGTGGGCGCTCCTCCCGTCCTCGCCCCGCCCTCTGCTCCGTCGCTGCTGCCTGGCAACCCTCCCGACCAATGGCAGGCGCCTGGGCACAGAAGGCCCCGCCCCCCGGCCCGTGATTGGCCGGGACTCTGTGGAGGTGTCGGGCCACTCCTACCCCCGCGACGACTTCACCAACGTCACGCCGAAGGTCCTGGACAAAGTCGGACGCAACCTCCACAACCAATCGCATCACCCGCTGTGGCTGATCAAGGAGCGAATCAAAGCGCACTTCTACAGTGCTTACGTTGGTCGCTGGGGCAACCCGCTCTTCTCCGTCCATGACAACCTGAGCCCCGTGGTTACCGTGGAGCAGAACTTCGACAG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU302743 lncRNA downstream 17784 27673565 ~ 27738562 (-) True G223643
TU302704 lncRNA downstream 36655 27632695 ~ 27719691 (-) False G223626
TU302702 lncRNA downstream 36655 27673689 ~ 27719691 (-) False G223626
TU302701 lncRNA downstream 36655 27714926 ~ 27719691 (-) True G223626
TU302720 lncRNA downstream 70367 27684390 ~ 27685979 (-) False G223640
TU302783 lncRNA upstream 17446 27813297 ~ 27813730 (-) True G223671
TU302784 lncRNA upstream 17446 27813297 ~ 27861633 (-) False G223671
TU302795 lncRNA upstream 57825 27853676 ~ 27854435 (-) True G223679
TU302803 lncRNA upstream 101283 27897134 ~ 27914827 (-) False G223681
TU302804 lncRNA upstream 101283 27897134 ~ 27915833 (-) False G223681
XM_039790778.1 mRNA downstream 56015 27694340 ~ 27700331 (-) False LOC120552596
XM_039790779.1 mRNA downstream 56015 27694340 ~ 27700331 (-) False LOC120552596
XM_039790780.1 mRNA downstream 56015 27694340 ~ 27700331 (-) True LOC120552596
XM_039790781.1 mRNA downstream 56015 27694540 ~ 27700331 (-) False LOC120552596
XM_039790783.1 mRNA downstream 56015 27695838 ~ 27700331 (-) False LOC120552596
XM_039790736.1 mRNA upstream 507483 28303334 ~ 28355647 (-) True LOC120552567
XM_039790787.1 mRNA upstream 581228 28377079 ~ 29112293 (-) True LOC120552600
XM_039790735.1 mRNA upstream 986039 28781890 ~ 28846252 (-) True LOC120552566
XM_039790785.1 mRNA upstream 1134380 28930231 ~ 29094205 (-) True dnah5l
XM_039790743.1 mRNA upstream 1329363 29125214 ~ 29147661 (-) True LOC120552571
TU302775 other downstream 2012 27750705 ~ 27754334 (-) True G223665
TU302776 other downstream 2990 27750705 ~ 27753356 (-) False G223665
TU302749 other downstream 16374 27738782 ~ 27739972 (-) True G223645
TU302745 other downstream 55965 27694854 ~ 27700381 (-) False LOC120552596
TU302721 other downstream 70367 27640564 ~ 27685979 (-) False G223640
TU302806 other upstream 101647 27897498 ~ 27915833 (-) False G223681
TU302801 other upstream 118752 27914603 ~ 27915833 (-) True G223681
TU302917 other upstream 398677 28194528 ~ 28195425 (-) True G223746
TU302918 other upstream 398677 28194528 ~ 28195425 (-) False G223746
TU302839 other upstream 411595 28207446 ~ 28332192 (-) False G223686

Expression Profile