RNA id: TU302831


Basic Information

Item Value
RNA id TU302831
length 655
lncRNA type read_through
GC content 0.51
exon number 5
gene id G223686
representative False

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 28011028 ~ 28517926 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTggtttgtcagagatcagctgtgctcCTCTTgcctcagctctgaagtccaacccctcccatctgaaagAGCTGAATCTGAGAGACAACGAGAACctgaaggattcaggagtgaagctgctgtgtGCTGGATTGGAGAGTCCaaactgtagactggagactctgagATTGGAGAGCTGCggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGACAGACAACTACAACctgaaggattcaggagtgaagcagctGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactctgagATTGTGGAACTGCggtttgtcagagatcagctgtgctgctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGGGTAACAACAAGAACCTGGAGcattcaggagtgaagcagctGTGTGCTGGATTGGAGAGTCCaaactgtagactggagactgTGAGattgGAGTACTGCagtttgtcagagatcagctgtgcttctctggcctcagctctgaagtccaacccctcccatctgaaagAGCTGGACCTGACTAGAAACTACAAAAtgaaggattcaggagtgaagcagctGTG

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU302919 lncRNA downstream 12201 28176365 ~ 28195245 (-) False G223746
TU302920 lncRNA downstream 12515 28194528 ~ 28194931 (-) False G223746
TU302921 lncRNA downstream 20808 28178570 ~ 28186638 (-) True G223747
TU302914 lncRNA downstream 21027 28120835 ~ 28186419 (-) True G223743
TU302883 lncRNA downstream 25337 28179702 ~ 28182109 (-) True G223714
TU302945 lncRNA upstream 62932 28395124 ~ 28395876 (-) True G223761
TU302872 lncRNA upstream 68771 28400963 ~ 28402922 (-) True G223703
TU302928 lncRNA upstream 70807 28402999 ~ 28457656 (-) True G223751
TU302946 lncRNA upstream 73437 28405629 ~ 28407886 (-) True G223762
TU302947 lncRNA upstream 73437 28405629 ~ 28406685 (-) False G223762
XM_039790778.1 mRNA downstream 507115 27694340 ~ 27700331 (-) False LOC120552596
XM_039790779.1 mRNA downstream 507115 27694340 ~ 27700331 (-) False LOC120552596
XM_039790780.1 mRNA downstream 507115 27694340 ~ 27700331 (-) True LOC120552596
XM_039790781.1 mRNA downstream 507115 27694540 ~ 27700331 (-) False LOC120552596
XM_039790783.1 mRNA downstream 507115 27695838 ~ 27700331 (-) False LOC120552596
XM_039790787.1 mRNA upstream 44887 28377079 ~ 29112293 (-) True LOC120552600
XM_039790735.1 mRNA upstream 449698 28781890 ~ 28846252 (-) True LOC120552566
XM_039790785.1 mRNA upstream 598039 28930231 ~ 29094205 (-) True dnah5l
XM_039790743.1 mRNA upstream 793022 29125214 ~ 29147661 (-) True LOC120552571
XM_039790744.1 mRNA upstream 793022 29125214 ~ 29147658 (-) False LOC120552571
TU302917 other downstream 12021 28194528 ~ 28195425 (-) True G223746
TU302918 other downstream 12021 28194528 ~ 28195425 (-) False G223746
TU302806 other downstream 291613 27897498 ~ 27915833 (-) False G223681
TU302801 other downstream 291613 27914603 ~ 27915833 (-) True G223681
TU302750 other downstream 411595 27756346 ~ 27795851 (-) True G223646
XR_005638031.1 other upstream 468307 28800499 ~ 28846253 (-) False LOC120552566
TU303066 other upstream 968498 29300690 ~ 29305614 (-) False LOC120552583
TU303131 other upstream 1147617 29479809 ~ 29543351 (-) False LOC120552608
TU303133 other upstream 1148426 29480618 ~ 29490705 (-) False LOC120552608
TU303182 other upstream 1218203 29550395 ~ 29563368 (-) True G223911

Expression Profile