RNA id: TU302914



Basic Information


Item Value
RNA id TU302914
length 319
lncRNA type intronic
GC content 0.44
exon number 2
gene id G223743
representative True

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 28120835 ~ 28186419 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTGCCTCAGCCTTcagtttcctcctcctgctctcttCTCTTCACACTTCTGTTAACTGTTGTGTGGTTGGTGTTGTATATTCTTCATATTCTTACTGAATACAAATTGCACTTTGTGACAaagaataaactgaactgaactgaaatggAGTCTCAACTTCCTGTTCTCATCGACCTGATCTGCTCCTCCCCCTCTTCATTTACAGGAAATCAGCTGAGTTtatctaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU302885 lncRNA downstream 13012 28103857 ~ 28107823 (-) True G223716
TU302852 lncRNA downstream 13455 28106828 ~ 28107380 (-) False G223688
TU302870 lncRNA downstream 70935 28048861 ~ 28049900 (-) True G223701
TU302906 lncRNA downstream 91188 28028857 ~ 28029647 (-) True G223735
TU302896 lncRNA downstream 110024 28009994 ~ 28010811 (-) True G223726
TU302920 lncRNA upstream 8109 28194528 ~ 28194931 (-) False G223746
TU302831 lncRNA upstream 21027 28207446 ~ 28332192 (-) False G223686
TU302842 lncRNA upstream 31680 28218099 ~ 28409054 (-) False G223686
TU302882 lncRNA upstream 42893 28229312 ~ 28498012 (-) False LOC120552569
TU302930 lncRNA upstream 44651 28231070 ~ 28236071 (-) True G223752
XM_039790778.1 mRNA downstream 420504 27694340 ~ 27700331 (-) False LOC120552596
XM_039790779.1 mRNA downstream 420504 27694340 ~ 27700331 (-) False LOC120552596
XM_039790780.1 mRNA downstream 420504 27694340 ~ 27700331 (-) True LOC120552596
XM_039790781.1 mRNA downstream 420504 27694540 ~ 27700331 (-) False LOC120552596
XM_039790783.1 mRNA downstream 420504 27695838 ~ 27700331 (-) False LOC120552596
XM_039790736.1 mRNA upstream 116915 28303334 ~ 28355647 (-) True LOC120552567
XM_039790787.1 mRNA upstream 190660 28377079 ~ 29112293 (-) True LOC120552600
XM_039790735.1 mRNA upstream 595471 28781890 ~ 28846252 (-) True LOC120552566
XM_039790785.1 mRNA upstream 743812 28930231 ~ 29094205 (-) True dnah5l
XM_039790743.1 mRNA upstream 938795 29125214 ~ 29147661 (-) True LOC120552571
TU302806 other downstream 205002 27897498 ~ 27915833 (-) False G223681
TU302801 other downstream 205002 27914603 ~ 27915833 (-) True G223681
TU302750 other downstream 324984 27756346 ~ 27795851 (-) True G223646
TU302751 other downstream 324984 27756346 ~ 27795851 (-) False G223646
TU302776 other downstream 367479 27750705 ~ 27753356 (-) False G223665
TU302917 other upstream 8109 28194528 ~ 28195425 (-) True G223746
TU302918 other upstream 8109 28194528 ~ 28195425 (-) False G223746
TU302839 other upstream 21027 28207446 ~ 28332192 (-) False G223686
XR_005638031.1 other upstream 614080 28800499 ~ 28846253 (-) False LOC120552566
TU303066 other upstream 1114271 29300690 ~ 29305614 (-) False LOC120552583

Expression Profile