RNA id: TU302971



Basic Information


Item Value
RNA id TU302971
length 272
lncRNA type intronic
GC content 0.51
exon number 3
gene id G223770
representative False

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 28585799 ~ 28621566 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ccacacacacacacacacacacacacagacacacacacagacacacacacacacacacagacagacagacagacacacacacacacacagacagacacacacacacacacacacacacacacacacacacacacagacagacagacagacacacacacacacacacacagacacacacacacacacacacacacacacagccacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacaccccc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU302818 lncRNA downstream 74046 28246813 ~ 28517926 (-) False G223686
TU302832 lncRNA downstream 74046 28246813 ~ 28517926 (-) True G223686
TU302940 lncRNA downstream 74153 28410371 ~ 28517819 (-) False G223758
TU302952 lncRNA downstream 89559 28502096 ~ 28502413 (-) True G223764
TU302882 lncRNA downstream 93960 28229312 ~ 28498012 (-) False LOC120552569
TU302966 lncRNA upstream 2760 28620567 ~ 28621566 (-) True G223770
TU302863 lncRNA upstream 28257 28646064 ~ 28711709 (-) True G223696
XR_005638039.1 lncRNA upstream 34148 28651955 ~ 28652924 (-) True LOC120552606
TU302981 lncRNA upstream 41102 28658909 ~ 28687092 (-) False G223778
TU302986 lncRNA upstream 41102 28658909 ~ 28691466 (-) True G223778
XM_039790742.1 mRNA downstream 94952 27258373 ~ 28497020 (-) False LOC120552569
XM_039790736.1 mRNA downstream 236325 28303334 ~ 28355647 (-) True LOC120552567
XM_039790778.1 mRNA downstream 891641 27694340 ~ 27700331 (-) False LOC120552596
XM_039790779.1 mRNA downstream 891641 27694340 ~ 27700331 (-) False LOC120552596
XM_039790780.1 mRNA downstream 891641 27694340 ~ 27700331 (-) True LOC120552596
XM_039790735.1 mRNA upstream 164083 28781890 ~ 28846252 (-) True LOC120552566
XM_039790785.1 mRNA upstream 312424 28930231 ~ 29094205 (-) True dnah5l
XM_039790743.1 mRNA upstream 507407 29125214 ~ 29147661 (-) True LOC120552571
XM_039790744.1 mRNA upstream 507407 29125214 ~ 29147658 (-) False LOC120552571
XM_039790769.1 mRNA upstream 533627 29151434 ~ 29161971 (-) True LOC120552587
TU302839 other downstream 259780 28207446 ~ 28332192 (-) False G223686
TU302917 other downstream 396547 28194528 ~ 28195425 (-) True G223746
TU302918 other downstream 396547 28194528 ~ 28195425 (-) False G223746
TU302806 other downstream 676139 27897498 ~ 27915833 (-) False G223681
XR_005638031.1 other upstream 182692 28800499 ~ 28846253 (-) False LOC120552566
TU303066 other upstream 682883 29300690 ~ 29305614 (-) False LOC120552583
TU303131 other upstream 862002 29479809 ~ 29543351 (-) False LOC120552608
TU303133 other upstream 862811 29480618 ~ 29490705 (-) False LOC120552608
TU303182 other upstream 932588 29550395 ~ 29563368 (-) True G223911

Expression Profile