RNA id: TU303066



Basic Information


Item Value
RNA id TU303066
length 791
RNA type TUCP
GC content 0.43
exon number 3
gene id LOC120552583
representative False

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29300690 ~ 29319934 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


AGATTGAGGAGCTGCagtttgtcagagatcagcGGCGCTGTTCTGGCCTCAcctctgaagtccaacccctcccatctgagagagctggacctgaagGACAACAACATGAAGGATTCAGACCTGAAGCATCTGTGTGATCTGAAGGAGAGTCCAGACTGTAGACTGGAGACAATGAAATTGAGGAGCTGCagtttgtcagagatcagctgtgctgCTCTGGCCTCAcctctgaagtccaacccctcccatctgagagagctggacctgaagGACAACATGAAAGATTCAGACGTGAAGCAGCTGTGTGATCTGAAGGAGAGTCCAGACTGTAGACTGGATACACTTGAATGTTGTCAGAGTGATCAGAAAGTTTGATGTGTTGACACCTGATGTGGAGTCCTCCATCATCCCTCTGTGTTCCTGACaagccagggaaattcaaaggtagcgttaTCAAACTGGAAGCAATACTTCttgctcattgaaattaaaggcaagaatgtttatgtaacatgcacgctatgcccaggaaaaaaaagtcacagttatTTTTCTGAGTAacaaattacttttataatgtggtaactgagttactaactcaattactttttgggagaagtaatttgtaactgtaactaattacttttttaaagtaagatgaccaacacttaAGTAAGTTAAGAAAAtagtttgccagattggatgtctagACTAGAAAATGGAGAAAGTATTTGAACTTTCTGGAGGtctcctaagaagctttgtgctggggagagactTGTATGAagggc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303090 lncRNA downstream 133013 29164646 ~ 29167677 (-) True G223852
TU303088 lncRNA downstream 135690 29163956 ~ 29165000 (-) True G223851
TU303084 lncRNA downstream 155039 29142928 ~ 29145651 (-) True G223847
TU303025 lncRNA downstream 372179 28908041 ~ 28928511 (-) True G223808
TU302869 lncRNA downstream 398259 28862375 ~ 28902431 (-) True G223700
TU303110 lncRNA upstream 32639 29338253 ~ 29339662 (-) True G223870
TU303113 lncRNA upstream 42960 29348574 ~ 29348985 (-) True G223873
TU303114 lncRNA upstream 42960 29348574 ~ 29354881 (-) False G223873
TU303117 lncRNA upstream 51005 29356619 ~ 29357892 (-) True G223876
TU303127 lncRNA upstream 155061 29460675 ~ 29534359 (-) False LOC120552609
XM_039790769.1 mRNA downstream 138719 29151434 ~ 29161971 (-) True LOC120552587
XM_039790743.1 mRNA downstream 153029 29125214 ~ 29147661 (-) True LOC120552571
XM_039790744.1 mRNA downstream 153032 29125214 ~ 29147658 (-) False LOC120552571
XM_039790787.1 mRNA downstream 188397 28377079 ~ 29112293 (-) True LOC120552600
XM_039790785.1 mRNA downstream 206485 28930231 ~ 29094205 (-) True dnah5l
XM_039790811.1 mRNA upstream 297488 29603102 ~ 29610341 (-) False dnph1
XM_039790810.1 mRNA upstream 297488 29603102 ~ 29610322 (-) True dnph1
XM_039790966.1 mRNA upstream 307974 29613588 ~ 29620659 (-) True LOC120552738
XM_039790967.1 mRNA upstream 323691 29629305 ~ 29672772 (-) True LOC120552739
XM_039790968.1 mRNA upstream 440894 29746508 ~ 29750259 (-) True inhbaa
XR_005638031.1 other downstream 454437 28800499 ~ 28846253 (-) False LOC120552566
TU302839 other downstream 968498 28207446 ~ 28332192 (-) False G223686
TU302917 other downstream 1105265 28194528 ~ 28195425 (-) True G223746
TU302918 other downstream 1105265 28194528 ~ 28195425 (-) False G223746
TU302806 other downstream 1384857 27897498 ~ 27915833 (-) False G223681
TU303131 other upstream 174195 29479809 ~ 29543351 (-) False LOC120552608
TU303133 other upstream 175004 29480618 ~ 29490705 (-) False LOC120552608
TU303182 other upstream 244781 29550395 ~ 29563368 (-) True G223911
TU303168 other upstream 432002 29737616 ~ 29746456 (-) True G223897
TU303248 other upstream 545042 29850656 ~ 29852068 (-) True LOC120552628

Expression Profile