RNA id: TU303132



Basic Information


Item Value
RNA id TU303132
length 274
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id LOC120552608
representative False

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29479809 ~ 29543351 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


GGCTGTCAGACTATGAAGAGTGACTGGTCGATGTCACAACCTGATTACTTGAGTAATGAACCGggaccctcagacacaaaaaagagggaaaggaGTGATGTTTGTGAGGAGGACCAGCCGTCCTGCTGTGCTTTGTGTCAGGACGTCCTGAAGGATCCAGTCTCTATCAGCTGTGGACACTGGTTCTGCAGACAGTGCATCACCTCATACTGGGACCAGTCTGCTTCATCAGGAGACTCCTGCTGTCCCCAGTGTGGAGAAAGATCCAGAACAA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303054 lncRNA downstream 1866 29475244 ~ 29538617 (-) True G223821
TU303127 lncRNA downstream 6124 29460675 ~ 29534359 (-) False LOC120552609
TU303059 lncRNA downstream 6799 29463074 ~ 29533684 (-) True LOC120552609
XR_005638041.1 lncRNA downstream 49267 29485731 ~ 29491216 (-) True LOC120552608
XR_005638042.1 lncRNA downstream 76183 29460763 ~ 29464300 (-) False LOC120552609
TU303187 lncRNA upstream 39738 29583089 ~ 29583794 (-) True G223915
TU303159 lncRNA upstream 46482 29589833 ~ 29690379 (-) False G223896
TU303160 lncRNA upstream 46482 29589833 ~ 29595629 (-) True G223896
TU303157 lncRNA upstream 49234 29592585 ~ 29690379 (-) False G223896
TU303158 lncRNA upstream 49234 29592585 ~ 29690379 (-) False G223896
XM_039790764.1 mRNA downstream 220549 29300944 ~ 29319934 (-) True LOC120552583
XM_039790769.1 mRNA downstream 378512 29151434 ~ 29161971 (-) True LOC120552587
XM_039790743.1 mRNA downstream 392822 29125214 ~ 29147661 (-) True LOC120552571
XM_039790744.1 mRNA downstream 392825 29125214 ~ 29147658 (-) False LOC120552571
XM_039790785.1 mRNA downstream 446278 28930231 ~ 29094205 (-) True dnah5l
XM_039790811.1 mRNA upstream 59751 29603102 ~ 29610341 (-) False dnph1
XM_039790810.1 mRNA upstream 59751 29603102 ~ 29610322 (-) True dnph1
XM_039790966.1 mRNA upstream 70237 29613588 ~ 29620659 (-) True LOC120552738
XM_039790967.1 mRNA upstream 85954 29629305 ~ 29672772 (-) True LOC120552739
XM_039790968.1 mRNA upstream 203157 29746508 ~ 29750259 (-) True inhbaa
TU303133 other downstream 49778 29480618 ~ 29490705 (-) False LOC120552608
TU303066 other downstream 234869 29300690 ~ 29305614 (-) False LOC120552583
XR_005638031.1 other downstream 694230 28800499 ~ 28846253 (-) False LOC120552566
TU302839 other downstream 1208291 28207446 ~ 28332192 (-) False G223686
TU302917 other downstream 1345058 28194528 ~ 28195425 (-) True G223746
TU303182 other upstream 7044 29550395 ~ 29563368 (-) True G223911
TU303168 other upstream 194265 29737616 ~ 29746456 (-) True G223897
TU303248 other upstream 307305 29850656 ~ 29852068 (-) True LOC120552628
XR_005638049.1 other upstream 308195 29851546 ~ 29856972 (-) False LOC120552628
XR_005638048.1 other upstream 308195 29851546 ~ 29856972 (-) False LOC120552628

Expression Profile