RNA id: TU303237



Basic Information


Item Value
RNA id TU303237
length 765
lncRNA type read_through
GC content 0.43
exon number 5
gene id G223948
representative False

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29837146 ~ 29865788 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


caggtatgtagagagagagacaggtatgtagagagagagagagagagagagagagagagactagatggagagagagacaggtatgtagaggagagagaggtttGTAGTGATAGAGAGACAATCAtgtggagagagacaggtatgtagatGAGAGAGAGACTAGATAGACCGAGAGagactagagagagagagagagagagagagagagagagactagatagacagagagagagagactagatggacagagagagagagactagatggagagagagacaggtatgtagaggagagagaggtttGTAGTGATAGAGAGACAATCAtgtggagagagacaggtatgtagatGAGAGAGAGACTAGATAGACCGAGAGAGactagatagagagagagactagatagacagagagagagagactagatggacagagagagagagagactagatggacagagagagagagagactagataGACAGAGATAGactagatagacagagagagtttagatatatatagactagatagacagagagagagagagagactagatagacagagagagaggctatatagagagagagagactggtaTGTAGGGATAGAGAGATATGGGTATGTAGAAAGTGTTcctgaacattttttttaaataagaaacAGAggtagaaagagagacacatacagagacagacatgtttGTAGAGAGAAATTCAGGtcggcagagacagacaggtttgtgggaagtgagagaaagagGGGAAGGAAT

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303174 lncRNA downstream 36076 29753130 ~ 29801070 (-) True G223903
TU303170 lncRNA downstream 44159 29700559 ~ 29792987 (-) True G223899
TU303155 lncRNA downstream 50540 29739843 ~ 29786606 (-) False G223895
TU303153 lncRNA downstream 50540 29757381 ~ 29786606 (-) True G223895
TU303154 lncRNA downstream 50540 29784812 ~ 29786606 (-) False G223895
TU303265 lncRNA upstream 42077 29907865 ~ 29908396 (-) True G223961
XR_005638054.1 lncRNA upstream 81283 29947071 ~ 29948139 (-) True LOC120552633
TU303290 lncRNA upstream 132046 29997834 ~ 30037330 (-) False G223974
TU303291 lncRNA upstream 132327 29998115 ~ 30037330 (-) False G223974
TU303288 lncRNA upstream 169989 30035777 ~ 30086423 (-) True G223974
XM_039790968.1 mRNA downstream 86887 29746508 ~ 29750259 (-) True inhbaa
XM_039790967.1 mRNA downstream 164374 29629305 ~ 29672772 (-) True LOC120552739
XM_039790966.1 mRNA downstream 216487 29613588 ~ 29620659 (-) True LOC120552738
XM_039790811.1 mRNA downstream 226805 29603102 ~ 29610341 (-) False dnph1
XM_039790791.1 mRNA upstream 34622 29900410 ~ 29924741 (-) True LOC120552613
XM_039790800.1 mRNA upstream 430694 30296482 ~ 30333279 (-) True xylb
XM_039790806.1 mRNA upstream 514321 30380109 ~ 30386006 (-) True crygn2
XM_039790795.1 mRNA upstream 539395 30405183 ~ 30420550 (-) True LOC120552615
XM_039790797.1 mRNA upstream 539395 30405183 ~ 30420549 (-) False LOC120552615
TU303168 other downstream 90690 29737616 ~ 29746456 (-) True G223897
TU303182 other downstream 273778 29550395 ~ 29563368 (-) True G223911
TU303131 other downstream 293795 29479809 ~ 29543351 (-) False LOC120552608
TU303133 other downstream 346441 29480618 ~ 29490705 (-) False LOC120552608
TU303066 other downstream 531532 29300690 ~ 29305614 (-) False LOC120552583
XR_005638047.1 other upstream 541168 30406956 ~ 30420547 (-) False LOC120552615
TU303357 other upstream 595714 30461502 ~ 30465869 (-) False G224031
XR_005638046.1 other upstream 609530 30475318 ~ 30493379 (-) False LOC120552614
TU303394 other upstream 766958 30632746 ~ 30681582 (-) True G224051
TU303612 other upstream 1344973 31210761 ~ 31211360 (-) True G224195

Expression Profile