RNA id: TU303265



Basic Information


Item Value
RNA id TU303265
length 391
lncRNA type intronic
GC content 0.43
exon number 2
gene id G223961
representative True

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 29907865 ~ 29908396 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ATTTGGTTTTTATTTATAATCACATGAAAAatgtagcctcgtgatggtttatccaatcagctaaccaggattttcagacagcggtagccctaattctgttagctgctcgctaatgcttttttctcttggatccttcttttggaatatggaccgggaacctgaaatgctgccttttattcctaaattctcgttacacaaacggcaaatctcctttaccgacatgttgcttgcttgctgagctaacgagctatgctttgcttgcagcagcaggggcgggcttgtggttgtattttcatacgcttcgtggatctgattggttgatttggcccgtctatcaccaacataggtgatagacagatggtttatccaatcagctaaccagtattttcgc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303237 lncRNA downstream 42077 29837146 ~ 29865788 (-) False G223948
TU303233 lncRNA downstream 42077 29864537 ~ 29865788 (-) False G223948
TU303236 lncRNA downstream 42077 29864537 ~ 29865788 (-) True G223948
TU303206 lncRNA downstream 64632 29743948 ~ 29843233 (-) True G223930
TU303174 lncRNA downstream 106795 29753130 ~ 29801070 (-) True G223903
XR_005638054.1 lncRNA upstream 38675 29947071 ~ 29948139 (-) True LOC120552633
TU303290 lncRNA upstream 89438 29997834 ~ 30037330 (-) False G223974
TU303291 lncRNA upstream 89719 29998115 ~ 30037330 (-) False G223974
TU303288 lncRNA upstream 127381 30035777 ~ 30086423 (-) True G223974
TU303300 lncRNA upstream 131336 30039732 ~ 30120856 (-) True G223983
XM_039790804.1 mRNA downstream 12270 29861802 ~ 29895595 (-) False eci2
XM_039790803.1 mRNA downstream 12272 29861802 ~ 29895593 (-) True eci2
XM_039790813.1 mRNA downstream 51060 29850963 ~ 29856805 (-) False LOC120552628
XM_039790968.1 mRNA downstream 157606 29746508 ~ 29750259 (-) True inhbaa
XM_039790967.1 mRNA downstream 235093 29629305 ~ 29672772 (-) True LOC120552739
XM_039790800.1 mRNA upstream 388086 30296482 ~ 30333279 (-) True xylb
XM_039790806.1 mRNA upstream 471713 30380109 ~ 30386006 (-) True crygn2
XM_039790795.1 mRNA upstream 496787 30405183 ~ 30420550 (-) True LOC120552615
XM_039790797.1 mRNA upstream 496787 30405183 ~ 30420549 (-) False LOC120552615
XM_039790796.1 mRNA upstream 496787 30405183 ~ 30420549 (-) False LOC120552615
XR_005638049.1 other downstream 50893 29851546 ~ 29856972 (-) False LOC120552628
XR_005638048.1 other downstream 50893 29851546 ~ 29856972 (-) False LOC120552628
TU303248 other downstream 55797 29850656 ~ 29852068 (-) True LOC120552628
TU303168 other downstream 161409 29737616 ~ 29746456 (-) True G223897
TU303182 other downstream 344497 29550395 ~ 29563368 (-) True G223911
XR_005638047.1 other upstream 498560 30406956 ~ 30420547 (-) False LOC120552615
TU303357 other upstream 553106 30461502 ~ 30465869 (-) False G224031
XR_005638046.1 other upstream 566922 30475318 ~ 30493379 (-) False LOC120552614
TU303394 other upstream 724350 30632746 ~ 30681582 (-) True G224051
TU303612 other upstream 1302365 31210761 ~ 31211360 (-) True G224195

Expression Profile