RNA id: TU303387



Basic Information


Item Value
RNA id TU303387
length 262
lncRNA type sense_over
GC content 0.47
exon number 3
gene id G224044
representative True

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 30530475 ~ 30584074 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


gtttaaagaaatgagaacgtgtgtgtgtgtctgtgtgtgtgtgtatgtatatgtgtgtgtgtgcatgcgtgcgtgcgtgtatttgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgaatgtgtgtctgtgtgtgtctgtgtctctgtctgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgggtgtgtgtgtgtgtgtgtgtgtgt

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303358 lncRNA downstream 37092 30397876 ~ 30493383 (-) False G224031
TU303365 lncRNA downstream 64606 30397876 ~ 30465869 (-) False G224031
TU303361 lncRNA downstream 86585 30441333 ~ 30443890 (-) False G224031
XR_005638053.1 lncRNA downstream 130546 30397913 ~ 30399929 (-) True LOC120552632
TU303334 lncRNA downstream 152467 30375412 ~ 30378008 (-) True G224016
TU303410 lncRNA upstream 130839 30714913 ~ 30719218 (-) True G224065
TU303429 lncRNA upstream 215894 30799968 ~ 30800263 (-) True G224081
TU303430 lncRNA upstream 215894 30799968 ~ 30800263 (-) False G224081
TU303417 lncRNA upstream 216540 30800614 ~ 30824856 (-) True G224069
TU303436 lncRNA upstream 231336 30815410 ~ 30816754 (-) True G224087
XM_039790793.1 mRNA downstream 37096 30446866 ~ 30493379 (-) True LOC120552614
XM_039790794.1 mRNA downstream 37096 30450088 ~ 30493379 (-) False LOC120552614
XM_039790792.1 mRNA downstream 37096 30474069 ~ 30493379 (-) False LOC120552614
XM_039790795.1 mRNA downstream 109925 30405183 ~ 30420550 (-) True LOC120552615
XM_039790797.1 mRNA downstream 109926 30405183 ~ 30420549 (-) False LOC120552615
XM_039789911.1 mRNA upstream 213110 30797184 ~ 30806336 (-) True LOC120552139
XM_039790834.1 mRNA upstream 433756 31017830 ~ 31020186 (-) False LOC120552646
XM_039790832.1 mRNA upstream 433756 31017830 ~ 31020186 (-) False LOC120552646
XM_039790831.1 mRNA upstream 433756 31017830 ~ 31020186 (-) True LOC120552646
XM_039790830.1 mRNA upstream 433756 31017830 ~ 31020186 (-) False LOC120552646
XR_005638046.1 other downstream 37096 30475318 ~ 30493379 (-) False LOC120552614
TU303357 other downstream 64606 30461502 ~ 30465869 (-) False G224031
XR_005638047.1 other downstream 109928 30406956 ~ 30420547 (-) False LOC120552615
XR_005638049.1 other downstream 673503 29851546 ~ 29856972 (-) False LOC120552628
XR_005638048.1 other downstream 673503 29851546 ~ 29856972 (-) False LOC120552628
TU303394 other upstream 48672 30632746 ~ 30681582 (-) True G224051
TU303612 other upstream 626687 31210761 ~ 31211360 (-) True G224195
TU303705 other upstream 715949 31300023 ~ 31301032 (-) True G224245
TU303660 other upstream 750732 31334806 ~ 31337397 (-) False LOC120551970
TU303782 other upstream 1031996 31616070 ~ 31665371 (-) True G224289

Expression Profile