RNA id: TU303530



Basic Information


Item Value
RNA id TU303530
length 858
lncRNA type inter_gene
GC content 0.42
exon number 2
gene id G224151
representative True

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 30996511 ~ 31073715 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


TTCTTCAAGatgtaaaatattttattttctgtaaatgATTCTAAATCAGATTCCAcattttccccccaaaaaaacaacaaaaaaaagcacaaacatCATCGTCGTCGTCGTCATGGTCACGCTGTGTttacattaataataaaaaactgaaacaagGTGTCGTCTAACTGTACACACGTCCTGATTAAACCTCATATGTACACGGCAGCAGGACtccacaacacaaagaaaagtcaAACTGAAAGATGCTCCGATGAAGGCCGCAGAGACACTCAGGAAGTCTGTTCACAGCCCTCGTCCAATCACAACGCAGCGCCTCCAGCGCCGGGACGCACGGGAAACACAAAAGGTGAAACTTTATTCAAAACTGGGACAGAACGCTGCTGGGACGGGCAGGTAGGAAGGTAGGTGATGAAGGTGATGAAGGTGAGGGTGTTAAAGGTAGCGCTCAGTGGAGTTATCTCTAAacttctctctgttttttcttttagctttttatgaTACAGATATTTACACGCTGCGACTCCGGGCCTCGAACTCACCGTGGATTTAGAAAATAGCTTTTCATTcagtaataaatacaaaaagaacaaaatctCTTATTTTACAGGAAATTAACAAAAcgcagagaggaagggaggaggaagaggaggaagagagagagagagagagagagagagagagagagagagagaggaggaatcaagtatgtttgtgtgggtatagctgtgtttttgtccttttatatttttgatagtGCAACTTTGCGTCCCTCTCTGTGAGGACGTTGTGTTATTTCAGTGGCGTTTACACTCACATTTACATCATATACACACAGAGGACCAGCCTCTcgtaagc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303497 lncRNA downstream 33069 30962281 ~ 30963442 (-) True G224133
TU303489 lncRNA downstream 59199 30937060 ~ 30937312 (-) True G224126
TU303476 lncRNA downstream 73701 30920803 ~ 30922810 (-) True G224118
TU303479 lncRNA downstream 73701 30920803 ~ 30922810 (-) False G224118
TU303475 lncRNA downstream 76602 30918503 ~ 30919909 (-) True G224117
TU303534 lncRNA upstream 14256 31011645 ~ 31190907 (-) True G224154
TU303536 lncRNA upstream 21134 31018523 ~ 31018823 (-) False LOC120552646
TU303504 lncRNA upstream 31017 31028406 ~ 31045131 (-) True G224135
TU303507 lncRNA upstream 31017 31028406 ~ 31086609 (-) False G224135
TU303502 lncRNA upstream 31429 31028818 ~ 31086609 (-) False G224135
XM_039789911.1 mRNA downstream 190175 30797184 ~ 30806336 (-) True LOC120552139
XM_039790971.1 mRNA downstream 397579 30579491 ~ 30598932 (-) True LOC120552744
XM_039790793.1 mRNA downstream 503132 30446866 ~ 30493379 (-) True LOC120552614
XM_039790834.1 mRNA upstream 20441 31017830 ~ 31020186 (-) False LOC120552646
XM_039790832.1 mRNA upstream 20441 31017830 ~ 31020186 (-) False LOC120552646
XM_039790831.1 mRNA upstream 20441 31017830 ~ 31020186 (-) True LOC120552646
XM_039790830.1 mRNA upstream 20441 31017830 ~ 31020186 (-) False LOC120552646
XM_039790836.1 mRNA upstream 21103 31018492 ~ 31020186 (-) False LOC120552646
TU303394 other downstream 314929 30632746 ~ 30681582 (-) True G224051
XR_005638046.1 other downstream 503132 30475318 ~ 30493379 (-) False LOC120552614
TU303357 other downstream 530642 30461502 ~ 30465869 (-) False G224031
XR_005638047.1 other downstream 575964 30406956 ~ 30420547 (-) False LOC120552615
XR_005638048.1 other downstream 1139539 29851546 ~ 29856972 (-) False LOC120552628
TU303612 other upstream 213372 31210761 ~ 31211360 (-) True G224195
TU303705 other upstream 302634 31300023 ~ 31301032 (-) True G224245
TU303660 other upstream 337417 31334806 ~ 31337397 (-) False LOC120551970
TU303782 other upstream 618681 31616070 ~ 31665371 (-) True G224289
TU303776 other upstream 627907 31625296 ~ 31660992 (-) False G224289

Expression Profile