RNA id: TU303547



Basic Information


Item Value
RNA id TU303547
length 279
lncRNA type sense_over
GC content 0.48
exon number 2
gene id G224162
representative True

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 31092919 ~ 31133405 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


acagagacacacacacacacacagacacacacacacagagagacacacacacacagagacacacacacacacacacagacacacaaacacacacagagatacacacacagagacacacacacagacaaagagagagacagacacacacacagagacagacacacacacacacacacacacacacacacacacacacacacacacacagacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacagtgaatga

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303561 lncRNA downstream 1669 31085914 ~ 31091250 (-) True G224172
TU303501 lncRNA downstream 6310 30966190 ~ 31086609 (-) False G224135
TU303507 lncRNA downstream 6310 31028406 ~ 31086609 (-) False G224135
TU303502 lncRNA downstream 6310 31028818 ~ 31086609 (-) False G224135
TU303500 lncRNA downstream 6310 31045569 ~ 31086609 (-) False G224135
TU303580 lncRNA upstream 28272 31161677 ~ 31348325 (-) True G224184
TU303543 lncRNA upstream 29324 31162729 ~ 31171801 (-) True G224158
TU303587 lncRNA upstream 36077 31169482 ~ 31169888 (-) True G224188
TU303542 lncRNA upstream 36964 31170369 ~ 31171801 (-) False G224158
TU303597 lncRNA upstream 74503 31207908 ~ 31208791 (-) False G224194
XM_039790832.1 mRNA downstream 72733 31017830 ~ 31020186 (-) False LOC120552646
XM_039789916.1 mRNA upstream 100349 31233754 ~ 31238960 (-) True LOC120552143
XM_039789917.1 mRNA upstream 165193 31298598 ~ 31328575 (-) True zbtb14
XM_039789570.1 mRNA upstream 197291 31330696 ~ 31337391 (-) True LOC120551970
XM_039790311.1 mRNA upstream 330207 31463612 ~ 31511341 (-) False epb41l3a
XM_039790310.1 mRNA upstream 330207 31463612 ~ 31507409 (-) False epb41l3a
TU303394 other downstream 411337 30632746 ~ 30681582 (-) True G224051
XR_005638046.1 other downstream 599540 30475318 ~ 30493379 (-) False LOC120552614
TU303357 other downstream 627050 30461502 ~ 30465869 (-) False G224031
XR_005638047.1 other downstream 672372 30406956 ~ 30420547 (-) False LOC120552615
XR_005638048.1 other downstream 1235947 29851546 ~ 29856972 (-) False LOC120552628
TU303612 other upstream 77356 31210761 ~ 31211360 (-) True G224195
TU303705 other upstream 166618 31300023 ~ 31301032 (-) True G224245
TU303660 other upstream 201401 31334806 ~ 31337397 (-) False LOC120551970
TU303782 other upstream 482665 31616070 ~ 31665371 (-) True G224289
TU303776 other upstream 491891 31625296 ~ 31660992 (-) False G224289

Expression Profile