RNA id: TU303549



Basic Information


Item Value
RNA id TU303549
length 311
lncRNA type inter_gene
GC content 0.57
exon number 2
gene id G224164
representative True

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 31037338 ~ 31094155 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CCCCAGGCTCCACTGCTGCGACCCCCCCGAGCCGTGACATTTCATCAGTCTGGGGGGGTCGAAGGTCCTGACCTCTGACACGTCCAGACACAGCAGCCCTGCCAGGACCAGCTGACCCTCCTCATCATAGGCCcagtcctacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacacggacagacacacacacacacacacacacacacacacacacacacacacacacacagggacagacagacacacacacagagacacacacacacacacacacacacaca

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303536 lncRNA downstream 18515 31018523 ~ 31018823 (-) False LOC120552646
TU303530 lncRNA downstream 39949 30996511 ~ 30997389 (-) True G224151
TU303497 lncRNA downstream 73896 30962281 ~ 30963442 (-) True G224133
TU303489 lncRNA downstream 100026 30937060 ~ 30937312 (-) True G224126
TU303476 lncRNA downstream 114528 30920803 ~ 30922810 (-) True G224118
TU303538 lncRNA upstream 781 31094936 ~ 31095272 (-) True G224157
TU303505 lncRNA upstream 10896 31105051 ~ 31120078 (-) False G224135
TU303499 lncRNA upstream 25529 31119684 ~ 31120078 (-) False G224135
TU303503 lncRNA upstream 25529 31119684 ~ 31120078 (-) False G224135
TU303580 lncRNA upstream 67522 31161677 ~ 31348325 (-) True G224184
XM_039790832.1 mRNA downstream 17152 31017830 ~ 31020186 (-) False LOC120552646
XM_039790826.1 mRNA upstream 3911 31098066 ~ 31102487 (-) True LOC120552642
XM_039789916.1 mRNA upstream 139599 31233754 ~ 31238960 (-) True LOC120552143
XM_039789917.1 mRNA upstream 204443 31298598 ~ 31328575 (-) True zbtb14
XM_039789570.1 mRNA upstream 236541 31330696 ~ 31337391 (-) True LOC120551970
XM_039790311.1 mRNA upstream 369457 31463612 ~ 31511341 (-) False epb41l3a
TU303394 other downstream 355756 30632746 ~ 30681582 (-) True G224051
XR_005638046.1 other downstream 543959 30475318 ~ 30493379 (-) False LOC120552614
TU303357 other downstream 571469 30461502 ~ 30465869 (-) False G224031
XR_005638047.1 other downstream 616791 30406956 ~ 30420547 (-) False LOC120552615
XR_005638048.1 other downstream 1180366 29851546 ~ 29856972 (-) False LOC120552628
TU303612 other upstream 116606 31210761 ~ 31211360 (-) True G224195
TU303705 other upstream 205868 31300023 ~ 31301032 (-) True G224245
TU303660 other upstream 240651 31334806 ~ 31337397 (-) False LOC120551970
TU303782 other upstream 521915 31616070 ~ 31665371 (-) True G224289
TU303776 other upstream 531141 31625296 ~ 31660992 (-) False G224289

Expression Profile