RNA id: TU303561


Basic Information

Item Value
RNA id TU303561
length 365
lncRNA type inter_gene
GC content 0.61
exon number 2
gene id G224172
representative True

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 31085914 ~ 31091250 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

gtaccTGTCCTCTCTGCAGGATTTTGGGTCTCCTCAGGCCCTTGTTGATGAACAGTGGCTGGGGCTTGTTGCCGTTGGCGACGGTCTGCATTTCGGGGTAGACGTTGTCGAGGTACCAGCCGAACGAGCGGCACTGCAGCCGCTTCCTCAACGCCACGCGCTCGCCGATGTCACCGTAGCTACGCTCACGGAGCTCAGGACGCAGGGACAGATACTGCTCCTGATTGGACCGCAGAGACACAGGAagtgagccACCGTGTTGCGTCTGTAAGCGGGCCAACAAAGAGCTGCCGCGAGGGACTGAACACCGAGGGATGCAGAGGGGCGGAGCTAGACTCTCAGTACAGTGGGGGCGGAGCTTCATC

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU303529 lncRNA downstream 12199 30996511 ~ 31073715 (-) False G224151
TU303504 lncRNA downstream 40783 31028406 ~ 31045131 (-) True G224135
TU303537 lncRNA downstream 47802 31033766 ~ 31038112 (-) True G224156
TU303536 lncRNA downstream 67091 31018523 ~ 31018823 (-) False LOC120552646
TU303530 lncRNA downstream 88525 30996511 ~ 30997389 (-) True G224151
TU303547 lncRNA upstream 1669 31092919 ~ 31133405 (-) True G224162
TU303538 lncRNA upstream 3686 31094936 ~ 31095272 (-) True G224157
TU303505 lncRNA upstream 13801 31105051 ~ 31120078 (-) False G224135
TU303499 lncRNA upstream 28434 31119684 ~ 31120078 (-) False G224135
TU303503 lncRNA upstream 28434 31119684 ~ 31120078 (-) False G224135
XM_039790832.1 mRNA downstream 65728 31017830 ~ 31020186 (-) False LOC120552646
XM_039790826.1 mRNA upstream 6816 31098066 ~ 31102487 (-) True LOC120552642
XM_039789916.1 mRNA upstream 142504 31233754 ~ 31238960 (-) True LOC120552143
XM_039789917.1 mRNA upstream 207348 31298598 ~ 31328575 (-) True zbtb14
XM_039789570.1 mRNA upstream 239446 31330696 ~ 31337391 (-) True LOC120551970
XM_039790311.1 mRNA upstream 372362 31463612 ~ 31511341 (-) False epb41l3a
TU303394 other downstream 404332 30632746 ~ 30681582 (-) True G224051
XR_005638046.1 other downstream 592535 30475318 ~ 30493379 (-) False LOC120552614
TU303357 other downstream 620045 30461502 ~ 30465869 (-) False G224031
XR_005638047.1 other downstream 665367 30406956 ~ 30420547 (-) False LOC120552615
XR_005638048.1 other downstream 1228942 29851546 ~ 29856972 (-) False LOC120552628
TU303612 other upstream 119511 31210761 ~ 31211360 (-) True G224195
TU303705 other upstream 208773 31300023 ~ 31301032 (-) True G224245
TU303660 other upstream 243556 31334806 ~ 31337397 (-) False LOC120551970
TU303782 other upstream 524820 31616070 ~ 31665371 (-) True G224289
TU303776 other upstream 534046 31625296 ~ 31660992 (-) False G224289

Expression Profile