RNA id: TU303580



Basic Information


Item Value
RNA id TU303580
length 374
lncRNA type read_through
GC content 0.48
exon number 4
gene id G224184
representative True

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 31161677 ~ 31348325 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


tgtgtgtttgtgtgtgtgtgtgtttgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgttttacctcttcttcttcttcctcttgtgtgtgtgtctgtgtgtgtgtctgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtctgtgtgtgtgtgtgtgtgtgagtgttgtgtgtgtgtgtctgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtctc

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303547 lncRNA downstream 28272 31092919 ~ 31133405 (-) True G224162
TU303545 lncRNA downstream 36352 31035092 ~ 31125325 (-) True G224160
TU303506 lncRNA downstream 41599 31045278 ~ 31120078 (-) False G224135
TU303505 lncRNA downstream 41599 31105051 ~ 31120078 (-) False G224135
TU303499 lncRNA downstream 41599 31119684 ~ 31120078 (-) False G224135
TU303648 lncRNA upstream 33418 31381743 ~ 31441813 (-) False G224211
TU303650 lncRNA upstream 33418 31381743 ~ 31458324 (-) False G224211
TU303667 lncRNA upstream 47139 31395464 ~ 31473602 (-) True G224219
TU303719 lncRNA upstream 58957 31407282 ~ 31408258 (-) True G224257
TU303720 lncRNA upstream 59156 31407481 ~ 31408465 (-) False G224257
XM_039790826.1 mRNA downstream 59190 31098066 ~ 31102487 (-) True LOC120552642
XM_039790831.1 mRNA downstream 141491 31017830 ~ 31020186 (-) True LOC120552646
XM_039790311.1 mRNA upstream 115287 31463612 ~ 31511341 (-) False epb41l3a
XM_039790310.1 mRNA upstream 115287 31463612 ~ 31507409 (-) False epb41l3a
XM_039790312.1 mRNA upstream 115287 31463612 ~ 31507408 (-) False epb41l3a
XM_039790313.1 mRNA upstream 115288 31463613 ~ 31507406 (-) False epb41l3a
XM_039790316.1 mRNA upstream 115288 31463613 ~ 31507405 (-) False epb41l3a
TU303394 other downstream 480095 30632746 ~ 30681582 (-) True G224051
XR_005638046.1 other downstream 668298 30475318 ~ 30493379 (-) False LOC120552614
TU303357 other downstream 695808 30461502 ~ 30465869 (-) False G224031
XR_005638047.1 other downstream 741130 30406956 ~ 30420547 (-) False LOC120552615
XR_005638048.1 other downstream 1304705 29851546 ~ 29856972 (-) False LOC120552628
TU303782 other upstream 267745 31616070 ~ 31665371 (-) True G224289
TU303776 other upstream 276971 31625296 ~ 31660992 (-) False G224289
TU303789 other upstream 294570 31642895 ~ 31652166 (-) False G224289
TU303774 other upstream 298029 31646354 ~ 31681892 (-) False G224289
TU303790 other upstream 298029 31646354 ~ 31665371 (-) False G224289

Expression Profile