RNA id: TU303597


Basic Information

Item Value
RNA id TU303597
length 454
lncRNA type inter_gene
GC content 0.51
exon number 2
gene id G224194
representative False

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 31207908 ~ 31208791 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

ttcacacagttacacattcatacctggaagttgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaagctgcccagtaccaccacagtctgatctgaccacattcatactggaagctgcccagtaccaccacagtctgatctgatcacattcatacctggaacctgcccagtaccaccacagtctgatctgatcacattcatactggaagctgcccaacACCacctggttagctcagttggtagagcgcgcgcccatatatggaggtttacacctcgactccgacctgcggtcctttgctgcatgtcctctctctctctctctctctctctctctctctctctccctctc

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU303534 lncRNA downstream 17001 31011645 ~ 31190907 (-) True G224154
TU303543 lncRNA downstream 36107 31162729 ~ 31171801 (-) True G224158
TU303542 lncRNA downstream 36107 31170369 ~ 31171801 (-) False G224158
TU303587 lncRNA downstream 38020 31169482 ~ 31169888 (-) True G224188
TU303547 lncRNA downstream 74503 31092919 ~ 31133405 (-) True G224162
TU303614 lncRNA upstream 1970 31210761 ~ 31211360 (-) False G224195
TU303620 lncRNA upstream 11243 31220034 ~ 31602620 (-) True G224200
TU303583 lncRNA upstream 35218 31244009 ~ 31263563 (-) False G224184
TU303581 lncRNA upstream 46725 31255516 ~ 31258479 (-) False G224184
TU303582 lncRNA upstream 46725 31255516 ~ 31324927 (-) False G224184
XM_039790826.1 mRNA downstream 105421 31098066 ~ 31102487 (-) True LOC120552642
XM_039790831.1 mRNA downstream 187722 31017830 ~ 31020186 (-) True LOC120552646
XM_039789916.1 mRNA upstream 24963 31233754 ~ 31238960 (-) True LOC120552143
XM_039789917.1 mRNA upstream 89807 31298598 ~ 31328575 (-) True zbtb14
XM_039789570.1 mRNA upstream 121905 31330696 ~ 31337391 (-) True LOC120551970
XM_039790311.1 mRNA upstream 254821 31463612 ~ 31511341 (-) False epb41l3a
XM_039790310.1 mRNA upstream 254821 31463612 ~ 31507409 (-) False epb41l3a
TU303394 other downstream 526326 30632746 ~ 30681582 (-) True G224051
XR_005638046.1 other downstream 714529 30475318 ~ 30493379 (-) False LOC120552614
TU303357 other downstream 742039 30461502 ~ 30465869 (-) False G224031
XR_005638047.1 other downstream 787361 30406956 ~ 30420547 (-) False LOC120552615
XR_005638048.1 other downstream 1350936 29851546 ~ 29856972 (-) False LOC120552628
TU303612 other upstream 1970 31210761 ~ 31211360 (-) True G224195
TU303705 other upstream 91232 31300023 ~ 31301032 (-) True G224245
TU303660 other upstream 126015 31334806 ~ 31337397 (-) False LOC120551970
TU303782 other upstream 407279 31616070 ~ 31665371 (-) True G224289
TU303776 other upstream 416505 31625296 ~ 31660992 (-) False G224289

Expression Profile