RNA id: TU303651


Basic Information

Item Value
RNA id TU303651
length 271
lncRNA type inter_gene
GC content 0.58
exon number 2
gene id G224211
representative False

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 31381743 ~ 31459095 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CTGGAAAGCCCCCCAGGTAGACGGGGTTGTTGGTCTCGGCAGAGGTGGATTGTGGGTAAGGGTTTGGGGTGGAGAAGCTCCGCCCATCAATGCTCAGGCTCAGGCTGTGTTTGGTCTTCCTGGCCAGGAGGCGGTGCCAGCGCGCATCACACAGCAACGGACCAATGGAACGCACCGATACTCGGCCAGCGCCGTTATTCACGTTAAACACCAcctgacacacacatacacacacacacacacacacacacacacacacacacacacacac

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU303648 lncRNA downstream 15023 31381743 ~ 31441813 (-) False G224211
TU303720 lncRNA downstream 48371 31407481 ~ 31408465 (-) False G224257
TU303719 lncRNA downstream 48578 31407282 ~ 31408258 (-) True G224257
TU303664 lncRNA downstream 51681 31327023 ~ 31405155 (-) True G224216
TU303675 lncRNA downstream 86736 31326689 ~ 31370100 (-) True G224227
TU303639 lncRNA upstream 1536 31460631 ~ 31471637 (-) False epb41l3a
TU303641 lncRNA upstream 1536 31460631 ~ 31471637 (-) False epb41l3a
TU303644 lncRNA upstream 1536 31460631 ~ 31471637 (-) False epb41l3a
TU303646 lncRNA upstream 1536 31460631 ~ 31464920 (-) True epb41l3a
TU303665 lncRNA upstream 7448 31466543 ~ 31468413 (-) True G224217
XM_039789570.1 mRNA downstream 119445 31330696 ~ 31337391 (-) True LOC120551970
XM_039789917.1 mRNA downstream 128261 31298598 ~ 31328575 (-) True zbtb14
XM_039789916.1 mRNA downstream 217876 31233754 ~ 31238960 (-) True LOC120552143
XM_039790826.1 mRNA downstream 354349 31098066 ~ 31102487 (-) True LOC120552642
XM_039790835.1 mRNA downstream 436650 31018565 ~ 31020186 (-) False LOC120552646
XM_039790311.1 mRNA upstream 4517 31463612 ~ 31511341 (-) False epb41l3a
XM_039790310.1 mRNA upstream 4517 31463612 ~ 31507409 (-) False epb41l3a
XM_039790312.1 mRNA upstream 4517 31463612 ~ 31507408 (-) False epb41l3a
XM_039790313.1 mRNA upstream 4518 31463613 ~ 31507406 (-) False epb41l3a
XM_039790316.1 mRNA upstream 4518 31463613 ~ 31507405 (-) False epb41l3a
TU303660 other downstream 119439 31334806 ~ 31337397 (-) False LOC120551970
TU303705 other downstream 155804 31300023 ~ 31301032 (-) True G224245
TU303612 other downstream 245476 31210761 ~ 31211360 (-) True G224195
TU303394 other downstream 775254 30632746 ~ 30681582 (-) True G224051
XR_005638046.1 other downstream 963457 30475318 ~ 30493379 (-) False LOC120552614
TU303782 other upstream 156975 31616070 ~ 31665371 (-) True G224289
TU303776 other upstream 166201 31625296 ~ 31660992 (-) False G224289
TU303789 other upstream 183800 31642895 ~ 31652166 (-) False G224289
TU303774 other upstream 187259 31646354 ~ 31681892 (-) False G224289
TU303790 other upstream 187259 31646354 ~ 31665371 (-) False G224289

Expression Profile