RNA id: XM_039789917.1


Basic Information

Item Value
RNA id XM_039789917.1
length 2644
RNA type mRNA
GC content 0.56
exon number 11
gene id zbtb14
representative True

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 31298598 ~ 31328575 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

CCGCGAGAGATGCTGCGCGCTCTCGAGCCGTTCATGGCCGCCGCCGCCGCTCGAACCCCGTCTCGTTCGTGTTGCCGAAGCTCGCGTGCCTGCGTCTCGGTCCCGGGGTCCGCGAGCGAGCCAGCACGCGGCCCGCCCGCTCACGGTCCCACCGGCCGACCGTTGGTGACGATACGTACAGCAGGTTTACCGGAGAAACTCCGTTAACGCAGAAacgccattttgttttttatgtttgtgaaaCAGCAGCCGGACTGTCCGCCATGTTACTGAAACAACTCCCTCAGATACCGTCTGAAACCTCCGGTAAACGGCTGTTTCTACCGCTGACACTAAGTTACACGGTTAACGTTTAAACGGGTTGAACCCGTGCTGTGCCACAAATATCCTAATCTTCACGTTTAGCGGTGTTTAAAGTCAATTTCAGCCGAGAAAAGTTTGATTTCTGTTACCGAATTTGCGTTACCATCCTAGGACGGAGAAGGAATGAcctgccctactctgcctctgattggctcatccTGGTGTTCATACTCTAACCCTAAACAATCCAACCACGAGGGCAGCGAGTACCAGCCAATCAGCGGCAGAGTGGGGCGGGACATTCCTTCGCCGTCCTAGGAAAACGCGAACAGCCAAGGTGGTTTCAGCGATAGTTGGAGTAAAATGTATCCGAGGAAAGGTGACCgggagccgggtacagagcaccgtgatGTGGCGGAGGTTCCAGCGGCCGTTAGAGTTGACTTAAGGCCGAGAAAAAGTACCTTTCCTTCGGCAACGAAAGTTAAGACACCAAGACGACcggttaagattagaaaaaaggaaagaaagaaagaactcCTGATCTATTGTGCTAAATCAATGTTAGCTTCGCAGATGCTAGTCCGTTAGCCTAGCCCACTTTAGTCCGAGTTAAATGCACTCCCGTATCAGAGCCTCCGGTACCGGCTGTTAGCGGATAAAAACCCGGTCTGTTCCGGTAAATACTGTCGGTATGCTCGATGTTAACAGCTAGCTGCTGTCTGTCCCCAAAATGGATCAGGAAGCGTGCACACGCTTTGGTGCGCGTGTCCGCTGTACAAAAGatgtgCGAGACCGTGAAGTACGTGGACAGTGAACACACCGCGGTGTTCCTGCGGCTGCTGAACGAGCAGCGCCTGGAGGGCGAGCACTGCGACATCGCCGTGGTCGTCGAGGACGTCAAGTTCCGCGCTCACCGCTGCGTGCTCGCCGCCTGCTCCAACTACTTCAAGAAACTCTTCAAGAAACACGAGGTGGACAACTCGTCTGTGATCGAGATCGACTTCATCCGGTCGGACATCTTCGAGGAGGTTCTGAACTACATGTACACGGCCAAGATctccgtcaggaaacgggacgtcaacctgatgatgtcatcgggGCAGATCCTGGGGATCCGCTTCCTCGACAAACTCTGCTCACAGAAACGAGACGTGTCATCAGAGGACAAAGACAAGTTTCCGTACGACATCGTGAAGATGGCGCTGCCGCCTGAAGCTCAGCTGGCCGCCGACGCCGAGGTTCTCGGGGAGCATGATGACGCACACACCACAGATGACCTCGTCGAGGCGTCGGCCAATCAGGAGCTAGATAAGTCTCCCAGTGCAGCTTTGCGTGTCCAGGAAGCCATCCTGAAAGAATTGACCAATGAGGACGTACACAAGGTGACCTGCTATGACCAGGATGTGGTGGCGGAGATGGAGGCGGAGCCTAAGGACCTGGGGGCGGAGCACCACGGCGCCCAGACGCTGGCGTTTGCCGACAGTATCGGCGAGGTGAAGGACGAGCAGCCGCCCGGCTGGACCACGGCCACCACCGACATGAAGTTTGAGTATCTGCTGTACGGACACCGAGAGACGCTCAACTGCCCCGTCTGTGGCAAGAGCTTCCTGGGGCGAGCCGCTCAAGATGCAGCACAAGCACAGGGGCTACACTCCAGGCCGGCCCGTTCGATCTGTGAGATCTGCACCAAAGCTTTCACCACCCAACACCTGAAGATCCACACGGGCTTCAAGCCCTACAGGTGTGACGTTTGTGGGAAATCGTTCATTCGAGCTCCGGACCTGAAAAAACACGAACGAGTTCACAGCAACGAGAGGCCGTTCGCCTGCCAGATGTGTGAGAAggcatTTAAACACAAGTCTCACCTGAAGGACCACGAGAGGAGACACCGAGGAGAGAAACCGTTCGTCTGTCCGTCCTGCACCAAAGCCTTCGCCAAGGCCCGTGCTCTGACCAGCGCCCACGAGAACAACATGCACAGCGAGAGGAAACAGCTGAACCCGCTGCAGAGCGACACGGAGACGCTGCAGGCCGCCGCCATGGCTGCCGAGGAGCAACATCTGGACAGCATCAGCTGATCCCAACATCTGGACAGCATCAGCTGATCCCAACATCTGGACAGCATCAGCTGATCCTCCTAAACATCTGGACCACATCAGCTGATCCTCCTAAACATCTGGACCACATCAGCTGATCCCAACAGCTGGACCACATCAGCTGATCCTCCTAAACAGCTGGACCACATCAGCTGATCCTCCTAAACAGCTGGACAGCATCAGCTGATCCTCCTAAACAGCTGGACCACATCAGCTGATCCTCCTAAACAGCTGCTGGACAG

Function

GO:

id name namespace
GO:0005634 nucleus cellular_component
GO:0046872 metal ion binding molecular_function
GO:0003676 nucleic acid binding molecular_function

KEGG:

id description
K24804 ZBTB14; zinc finger and BTB domain-containing protein 14

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU303674 lncRNA downstream 15018 31256108 ~ 31283580 (-) True G224226
TU303583 lncRNA downstream 35035 31244009 ~ 31263563 (-) False G224184
TU303581 lncRNA downstream 40119 31255516 ~ 31258479 (-) False G224184
TU303614 lncRNA downstream 87238 31210761 ~ 31211360 (-) False G224195
TU303597 lncRNA downstream 89807 31207908 ~ 31208791 (-) False G224194
TU303648 lncRNA upstream 53168 31381743 ~ 31441813 (-) False G224211
TU303650 lncRNA upstream 53168 31381743 ~ 31458324 (-) False G224211
TU303667 lncRNA upstream 66889 31395464 ~ 31473602 (-) True G224219
TU303719 lncRNA upstream 78707 31407282 ~ 31408258 (-) True G224257
TU303720 lncRNA upstream 78906 31407481 ~ 31408465 (-) False G224257
XM_039789916.1 mRNA downstream 59638 31233754 ~ 31238960 (-) True LOC120552143
XM_039790826.1 mRNA downstream 196111 31098066 ~ 31102487 (-) True LOC120552642
XM_039790831.1 mRNA downstream 278412 31017830 ~ 31020186 (-) True LOC120552646
XM_039789570.1 mRNA upstream 2121 31330696 ~ 31337391 (-) True LOC120551970
XM_039790311.1 mRNA upstream 135037 31463612 ~ 31511341 (-) False epb41l3a
XM_039790310.1 mRNA upstream 135037 31463612 ~ 31507409 (-) False epb41l3a
XM_039790312.1 mRNA upstream 135037 31463612 ~ 31507408 (-) False epb41l3a
XM_039790313.1 mRNA upstream 135038 31463613 ~ 31507406 (-) False epb41l3a
TU303612 other downstream 87238 31210761 ~ 31211360 (-) True G224195
TU303394 other downstream 617016 30632746 ~ 30681582 (-) True G224051
XR_005638046.1 other downstream 805219 30475318 ~ 30493379 (-) False LOC120552614
TU303357 other downstream 832729 30461502 ~ 30465869 (-) False G224031
XR_005638047.1 other downstream 878051 30406956 ~ 30420547 (-) False LOC120552615
TU303660 other upstream 6231 31334806 ~ 31337397 (-) False LOC120551970
TU303782 other upstream 287495 31616070 ~ 31665371 (-) True G224289
TU303776 other upstream 296721 31625296 ~ 31660992 (-) False G224289
TU303789 other upstream 314320 31642895 ~ 31652166 (-) False G224289
TU303774 other upstream 317779 31646354 ~ 31681892 (-) False G224289

Expression Profile