RNA id: TU303720



Basic Information


Item Value
RNA id TU303720
length 490
lncRNA type inter_gene
GC content 0.41
exon number 3
gene id G224257
representative False

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 31407282 ~ 31408465 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


CTAAACACTGGGCCAATAtatcatcacatgttcactcactaggaccactactactggcattactaaacactgggccaatatatcatcacatgttcactcactaggaCctcTACTACTGACATTACTAAACACTGGGCCAATAtatcatcacatgttcactcactaggaCCTCTACTACTGGCATTACTAAACATTGGGCCAATAtatcatcacatgttcactcactatgacCTCTACTACTGGCATTACTAAACACTGGGCCAATAtatcatcacatgttcactcactatgacctcTACTACTGGCATTACTAAACACTGGGCCAATAtatcatcacatgttcactcactaggaCCTCTACTACTGGCATTACTAAACACTGGGCCAATAtatcatcacatgttcactcactaggaCCTCTACTACTGGCATTACTAAACACTGGGCCAATAtatcatcacatgttcactcactaggaCCTCTACTACTG

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU303664 lncRNA downstream 2326 31327023 ~ 31405155 (-) True G224216
TU303675 lncRNA downstream 37381 31326689 ~ 31370100 (-) True G224227
TU303676 lncRNA downstream 40345 31313315 ~ 31367136 (-) True G224228
TU303677 lncRNA downstream 46820 31257699 ~ 31360661 (-) True G224229
TU303670 lncRNA downstream 81268 31324994 ~ 31326213 (-) True G224222
TU303669 lncRNA upstream 26796 31435261 ~ 31481460 (-) True G224221
TU303654 lncRNA upstream 45294 31453759 ~ 31459095 (-) False G224211
TU303649 lncRNA upstream 45467 31453932 ~ 31458324 (-) False G224211
TU303653 lncRNA upstream 45467 31453932 ~ 31459095 (-) True G224211
TU303651 lncRNA upstream 48371 31456836 ~ 31459095 (-) False G224211
XM_039789570.1 mRNA downstream 70090 31330696 ~ 31337391 (-) True LOC120551970
XM_039789917.1 mRNA downstream 78906 31298598 ~ 31328575 (-) True zbtb14
XM_039789916.1 mRNA downstream 168521 31233754 ~ 31238960 (-) True LOC120552143
XM_039790826.1 mRNA downstream 304994 31098066 ~ 31102487 (-) True LOC120552642
XM_039790835.1 mRNA downstream 387295 31018565 ~ 31020186 (-) False LOC120552646
XM_039790311.1 mRNA upstream 55147 31463612 ~ 31511341 (-) False epb41l3a
XM_039790310.1 mRNA upstream 55147 31463612 ~ 31507409 (-) False epb41l3a
XM_039790312.1 mRNA upstream 55147 31463612 ~ 31507408 (-) False epb41l3a
XM_039790313.1 mRNA upstream 55148 31463613 ~ 31507406 (-) False epb41l3a
XM_039790316.1 mRNA upstream 55148 31463613 ~ 31507405 (-) False epb41l3a
TU303660 other downstream 70084 31334806 ~ 31337397 (-) False LOC120551970
TU303705 other downstream 106449 31300023 ~ 31301032 (-) True G224245
TU303612 other downstream 196121 31210761 ~ 31211360 (-) True G224195
TU303394 other downstream 725899 30632746 ~ 30681582 (-) True G224051
XR_005638046.1 other downstream 914102 30475318 ~ 30493379 (-) False LOC120552614
TU303782 other upstream 207605 31616070 ~ 31665371 (-) True G224289
TU303776 other upstream 216831 31625296 ~ 31660992 (-) False G224289
TU303789 other upstream 234430 31642895 ~ 31652166 (-) False G224289
TU303774 other upstream 237889 31646354 ~ 31681892 (-) False G224289
TU303790 other upstream 237889 31646354 ~ 31665371 (-) False G224289

Expression Profile