RNA id: XM_039789425.1


Basic Information

Item Value
RNA id XM_039789425.1
length 6474
RNA type mRNA
GC content 0.49
exon number 37
gene id myo3a
representative False

Chromosome Information

Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 21485222 ~ 21545450 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence

GTTTGTATCTAAAATCCTTTACCCTTACCATCCATGTGTCTCTGATGGATTATGGTGAGAGGGAACAAAGCGAACAAAGGAGATCTCTCCTAAAGATGTTTCCACAACCAGGGAAATCGATTGTCTTCGACAACTTTCCAGATCCCACTGACGTCTGGGACATCATCGAGACAATCGGGAAAGGGACCTATGGAAAAGTCTACAAGGTGCTCAACAAACTTGATGGAAGTAAAGCGGCTGTAAAGATCCTTGATCCAATCCATGATATTGATGAGGAGATCGAAGCAGAGTACAACATCCTCAAAGCTCTTTCTGACCACACCAATGTTGTCAAATTCTACGGGATGTACTACAAGAAGGATGTGAAATGTGGAGACCAGTTGTGGCTCGTATTGGAGCTCTGTAACGGCGGCTCTGTGACAGATCTGGCTAAAGGCATGCTGAAGAGAGGAGACCGAATGGATGAAGCCATTATTGCCTACATCTTGCATGAGGCCCTCATGggCCTCCAGCACCTGCACGTCAACAAAACCATCCACCGCGACGTCAAAGGCAATAACATCCTGCTGACGACACATGCAGGGGTCAAACTCGTGGATTTTGGTGTTTCAGCCCAGCTGACAAATACCCGTCTGAGGAGGAACACCTCTGTGGGAACTCCCTTCTGGATGGCTCCGGAGGTAATAGCATGTGAGCAGCAGCTGGACTCAACCTACGATGCTCGTTGTGATGTCTGGTCACTCGGCATCACCGCCATAGAGCTGGGAGATGGAGACCCACCCCTCTCCGAACTCCACCCAATGAGAGCCCTTTTCAAAATACCCAGAAATCCTCCACCTACTCTCCACCAGCCGGAGCTCTGGTCAGACGAATTTAATGACTTCATCTGCAAATGTCTGATTAAGGACTTTGAGCTGAGACCAAATGTGCTAGACCTGCTCCAGCATGTGTTCATCAAACAGATTGTTGACAGAGAGAAAATACTGCAGAAACAGTTAATTGAACTCATTGATCTCAACCAACAAATCGGAGTCGTTGATAAAACAAGTTCTAGGCATGAACGCATCCACACTAAAAGAGGAGGCCACATGAAGACACAGACTGACCCCGATGAGGTGGAGGACCTCGCCACCCTAGAAGTTCTGGATGAGAACACGGTCACAGAGCAGCTCCAGACTCGCTATGGACGAGATCAAATCTACACGTATGTTGGAGACATCCTCATCGCAGTCAATCCTTTCCATAAGATGGAGATTTACACATCCCAGTACACCAAGATGTACATAGGGGCTAAGCGTACAGTTAACCCACCGCACATCTTCGCTGTGGCCGATATCGCCTACCAGTCCATGGTGTCGTACAATGCAGACCAGTGTGTTGTGATCAGTGGGGAAAGTGGAGCTGGGAAAACAGAGAGTGCTCATCTATTGGTACAGCAGCTGACAGTACTTGGCAAGGCCAATAATCAGACGCTCCAGGAGAAGATCCTTCTCGTTAACAGCCTGGTGGAAGCATTTGGAAACGCCTGCACCGTCATCAATAACAACTCCAGCCGCTTTGGCAAGTACCTGGAGATGAAGTTCACCTGCGGAGGAACAGTGGTCGGAGCGCAGATATCCGAGTACCTGCTGGAGAAATCCAGGGTCATCCACCAGGCAGTAGGGGAGAGGAACTTCCACATCTTCTACTACATTTATGCTGGCCTGGCTGACAGGAAGAAACTAGCCCACTACAAGCTCTCTGACAGCAAAACACCTAAGTATCTGTGTAATGAGCATATTAAATTAGGGCCTGACATAGTGAGCAACACCTTCTACAAGGAGCAGTTTGATGCAGTCGAGCAGTGTTTCAAAGTCATTGGATTCACCCTGGAGGAGCTGGGCAGTGTTTACAGCACTCTGGCTGCCATCCTCAACTCAGGGGATATTGAATTTTCTCCGGTTGCTTCTGAGCACCAAACAGACAAGAGTGACATCTCCAACATTTCTGTCCTGGAGaacgTGGCATCACTGCTGTGTATCCGCTCAGACGAGCTCCAGGAAGCCCTGACCTCCCACTGTGTTGTGGCCCGGGGAGAGACCATCGTCAGGCCCAACACGGTGGAAAAGGCGGCGGAGGTGAGAGACGCCATGGGCAAGGCTCTCTACGGCCGCCTCTTCAGCTGGATTGTCAACAGAATCAACGCGCTGCTGCGTCCTGACAGCCACCCAGGAGAGGACGACAAGGGATTTAACATCGGCATCCTGGACATCTTTGGTTTCGAGAACTTCAAGAAGAACTCTTTCGAGCAGCTCTGCATCAACATCGCCAACGAGCAGATCCAGTTTTACTTCAACCAGCATATATTCGCTTGGGAACAGGATGAGTACCTGAATGAGGAGGTGGATGCTCGGATGATTGAGTACGAGGACAACCGGCCCCTCCTGGACCTGTTCTTGCAGAAACCCATGGGGATGCTCTCGCTCCTGGATGAGGAGAGTCGGTTCCCCCAGGCCACCGACCAGACCCTCGTAGAGAAATTCGAAGATAACCTGAAGACCAAAAGCTTCTGGAGACCAAAGAGAGTAGACCTTGGCTTTGGTATTCACCACTACGCTGGAAAGGTGATTTACAATGCTGCCGGCTTCTTGGCCAAGAACAGGGACCTGCTACCGGCCGACATCGTCCTGCTGCTGAGGTCGTCAGAAAACGAGCTTGTTCGCAAGCTTGTCACCCATCCCTTAACCAAAACAGGCAACCTTGCCCACACCAAGGGTAAAGGCAAAAACACAATGCGCAGCCCGCGGACGCCGACACGCACCATCACCTTCGCCAAGATGGGAGTGCTAACCTTATACAgttctttttctttcagtgaGCCAGGTGAACCTGCAGACACGCCTTACCACCCGAGAGAAACCACCAACATGAGAACACAGACAGTGGCCTCTTACTTCAGATACTCTCTGATGGACCTGCTGTCCAAGATGGTGGCAGGGCAGCCTCACTTTGTTCGCTGTATCAAACCAAACAACGATCGCCAGGCCAGTAAGTTTGACCGGGAGAAGGTCCTGGTTCAGCTGCGATACACTGGAGTTCTGGAGACCGCCAAGATCAGACGGCAGGGCTACTCTCACCGCATCCTGTTTGCTAACTTCATGAAGAGGTATTACATCTTGGCTTTCCATGCTCACGAGGAGCCGGCTGTGACTCAAGAAACATGTGGTGCAGTACTGGAGAAGGCCAAGCTGGAGAACTGGGCAATGGGGAAGACTAAGGTGTTCCTCAAATACTACCACGTTGAACATCTGAACCTGATGGTGCAGCAGGCCACACAGCGGATCATTCTGCTCCAGGCTTACGTGCGAGGCTGGCTGGGAGCCAAACGATACCGGCTGgtattaaaagagagagaacagagtgCTCTGGTGCTGCAATCAGCTTACAGAGGTCATAAAGTTCGGAAGAGAGTGGCCGATGACAAAAGCAAAGCAAAGATTGAGGCCTTGATCGGCCAGTTTCAGGCTGTTTGCAAGGGCCATCTGGCAAGAAAGAAATACAAGGAGTTGGTAGAGGAGAAGAACAAGGCTGCAACCAAGATTCAGGCTCGCTACAGAGGGCACAAGGAAAGGAAAAGCTTCAAAAGAAAACGGGAAGCCAAAGAAAAAGAGCAAGCACAGAAGGCCcttaaagaaaaagaggaagagactCCTGAACCAGAGGagatcaccaatgaagaaagttCCTCCGCTCCCGCAGTCGAAGCGAATAACGAGGAAGATGAAACTAAGGCTGCCATTGTTCTCCAGAGCAACTTCAGGGGctacaaagagagaaaaaagtttaaggagagaaaaaaaacgatGTCCGGAGCCGAATTAGAGTTTCCACCGAATGCAGTGGTGGAACAAGAAGGTGGACAAGAGCCGACCGGCAACGAAGAGGAAAGGGTAAAGACGGCTGATAAAACGGAGAATGACGACGACGAAGAAAGCACGTATGAAGCAGAGGAGAATGATGACAGTGATCACACACAGGTGCCAGAAGATGAGGAACACACAGAAGTGGCAGATGAAGCCATGATTGAGGATGTACTGGCAGCAGAAGCTGGAAAAGAAGGGCGGGAGGAGGACAAGAAGGAGGAGAACGGTCAAGAGAAGGCTGCAGGGGAAGAGGCTGTTAACATAGAAGAAGAAACAAAGGCTGCCACTGTCATCCAGAGTAATTTCAGAGGTcacaaagagaggaagaggttgCAGGACGAAGGCAAGATCCCAGCTAAGAAACAGAAAGCGAAAGGTCCTTCTGGTGAAGAGGCAGTGCCCACAGTAAGCAGCCCTACGGGTGAGGAAGAGGTGCCCGCAGGTCAAACGCCAGCAGAAGAAGTCGGCAACGTGgcgacagaaaaaaaagaagaatcacCGAAAGCTCAAGATGCAGCAGATGCTTCTTCAAGTGACGTCCAGTCAGAGGGCCAAGACCAGGCCAAAGCAGCTGTGGTGCTTCAGAGCAACTTTCGTGGCCACAAGGAGCGCAAACGACTCGAAGAGGAAGGAAAGATcccgaagaagaaaaagaaggaaaaagaaatTACACCCGAACctccaaaagaagaagaagaagaagaacaggtAACGCAGACAGAAGAATCAGGGCCAGAATCCCAGCCGGATGCTTCTGCGGAGGGACTGGACGAGGAAAGAGCTGCTACTGTCCTTCAGAGCAACTTCAGAGGCCACCGGGACCGGAAGAAACTGAAAGCAGAGAGGGAaacgcaaaagaaaacaaaggaagAAGCTGCAAATGATGCAGAAGAGGAAACTAAAGATGGGGACGAGGCCCTGGATGTTACCGATGTGATGATAGAACGTAAAGAGGAGACAGATGCTGAAAAAGAGAGACTGGAGGAGGAGCAGGCTGCAGTGAAGATCCAGAGCAACTTCAGAGGGTACAAGGACAGGAAGAACCTGAAGGCCAACAAGCAAACAGCGCAGACAGAAGCTGCGCAACTAGAGCGCTTCTCCAAAGAGATCACAAACACTTCTCAGGACTTCTTGGCCCTGCAGCACAAGTTGAATGAGATCATCCAGGCCCATCAATCAAATCCTGAGGACAATGGCATGTTTGTGAGAGGAAAAGCAATCAATGGCTTCGCTCCTCAGAATCACCAATCAACTGACAAGAGGCAGCCGAGGACCCCCCGCAGGACCCAGCAGCCAAAGACCCTCAACACACTAGAGGACTCCACCTATTACAACTTGATTCATCGAACAATAGCTCAGCGCAAAATAGCTCTTTTTGCAACACTTCAGCGGTCTGTCCAGGATGATAAACGCAAGCCCAGGAAAGAGGATCCAGGGAAGCTGCTGGATGTGGATGACCACTACTACCGGGAACTGTCCACCAGCAGGTCTGAACCCTGCATCTCCACAGAGGACACATCACCCAGCAGCATGCCTGAGAGAAGACAGTCTACAGAGTGGAGAGGGTCCATGGACAGGAAGCAGTCTACAGAGAGGAGAGGGTCCATGGACAGGAAGCAGTCTACAGAGAGGAGAGGGTCCATGGACAGGAAGCAGTCTACAGAGAGGAGAGGGTCCATGGACAGGAAGCAGTCTACAGAGAGGAGAGGGTCCATGGACAGGAAGCAGTCTACAGAGAGGAGAGGGTCCATGGACAGGAAGCAGACTACAGAGAGGAGAGGGTCCATGGACAGGAAGCAGACTACAGAGCTGACACCAGCAGCTGCCAGTAGACCGCCCAGAGAGAGGGCCGTCACTGAACCAGAGCCTCCCAAACCTGTGAGGGACAACAGGCGCTCAGTTCCCAGAATGCCCTCCACAGAGAGTCGGACTGAGGACAATCCGTATGACTTCAGACATATTCTGAGGAAGACCTCCCAGAGACGAAGGCTCATCAAACACTACAAATGACTGAACCTTTTTAGCCATTTGGAAAATAATCTGTGTCAATGTATTATCATATATCATGCTATGTGATATACGAGGATTTTAATTCATTACAGCTTCTTGAAAAACCTTGAGGCAAATGAAAAGCACTGACTGCATTGATTATAATTATTATCACCATTATCACCACCAGTCTAATGAATCTAAATgcagcatagacagtataagggtaaatgtaaataataaaatgctaTACCTTTAAAACTGTAAATGAAGGTTTTATTTGTGTAACTTGTAAATTAGACATTGCTACATTTGCTCATGTTGCTGTATCAGTTTCCCTTCTGGTTGGTCAAATATTGTGTTTGAGGTTGTCCATATCCATTTAAACATCAAATAGAATTGTAAAAAATCACGTAAATACAAAAGCCATCATTACTTTGCATTTTAATCCATTTTGAAAGATGTATCTTTCGGGGGGGGGGAGCTGCTTCGGTGTTGTCACATTGTAAGAAATGTACAATTGTCCTCTGCTGTTATCTctgttttgttcatttaaatgtaaaatatatcaaattCCTTGTGA

Function

GO: NA

KEGG: NA

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TU299875 lncRNA downstream 67215 21415951 ~ 21418007 (-) True G221616
TU299861 lncRNA downstream 112531 21345698 ~ 21372691 (-) False G221604
TU299860 lncRNA downstream 112531 21364801 ~ 21372691 (-) True G221604
TU299823 lncRNA downstream 164812 21319890 ~ 21320410 (-) True G221582
TU299807 lncRNA downstream 183175 21301484 ~ 21302047 (-) True G221567
TU299960 lncRNA upstream 186236 21731287 ~ 21731487 (-) True G221695
TU299984 lncRNA upstream 269445 21814496 ~ 21815723 (-) True G221708
TU299991 lncRNA upstream 287105 21832156 ~ 21832884 (-) True G221712
TU300069 lncRNA upstream 399319 21944370 ~ 21944690 (-) True G221768
TU300100 lncRNA upstream 546490 22091541 ~ 22091753 (-) True G221793
XM_039789436.1 mRNA downstream 1048 21464099 ~ 21484174 (-) True gad2
XM_039790964.1 mRNA downstream 42646 21413132 ~ 21442576 (-) True LOC120552736
XM_039790034.1 mRNA downstream 91606 21386640 ~ 21393616 (-) True pdss1
XM_039790035.1 mRNA downstream 91657 21386640 ~ 21393565 (-) False pdss1
XM_039790028.1 mRNA downstream 155419 21321300 ~ 21329803 (-) True acbd5a
XM_039789437.1 mRNA upstream 19818 21564869 ~ 21574510 (-) True LOC120551882
XM_039790300.1 mRNA upstream 30555 21575606 ~ 21587153 (-) False anxa13
XM_039790299.1 mRNA upstream 30555 21575606 ~ 21587153 (-) True anxa13
XM_039790301.1 mRNA upstream 45893 21590944 ~ 21598756 (-) True LOC120552336
XM_039790419.1 mRNA upstream 59664 21604715 ~ 21689934 (-) False gpr158a
TU299660 other downstream 622557 20836297 ~ 20862665 (-) False LOC120552536
TU299133 other downstream 2158328 19315591 ~ 19326894 (-) True G221048
TU298948 other downstream 2535741 18938999 ~ 18949481 (-) False mettl4
TU298817 other downstream 2853747 18610236 ~ 18631475 (-) True G220833
XR_005637957.1 other upstream 444966 21990017 ~ 22009088 (-) True tfr1b
TU300141 other upstream 657732 22202783 ~ 22218366 (-) False smpx
TU300142 other upstream 657732 22202783 ~ 22217549 (-) True smpx
TU301970 other upstream 3418394 24963445 ~ 24967990 (-) False msl2b
TU302014 other upstream 3511542 25056593 ~ 25086708 (-) False LOC120552232