RNA id: unassigned_transcript_1419



Basic Information


Item Value
RNA id unassigned_transcript_1419
length 74
RNA type tRNA
GC content 0.61
exon number 1
gene id trnai-aau_30
representative True

Chromosome Information


Item Value
chromosome id NC_053133.1
NCBI id CM020930.1
chromosome length 31697812
location 26447686 ~ 26447759 (-)
genome version GENO_Pfluv_1.0_2020_eurasian_perch_Genome
species eurasian perch
(Perca fluviatilis)

Sequence


ggccggttagctcagttggttaGAGCGTGGTGCTAATAACGCCAAGGTCGCGGGTTCGATCCCCGTACGGGCCA

Function


GO: NA

KEGG: NA

JBrowse2


Neighbor


RNA id RNA type direction distance location representative gene id
TU302320 lncRNA downstream 340699 26106712 ~ 26106987 (-) True G223371
TU302282 lncRNA downstream 361006 26026105 ~ 26086680 (-) True G223348
TU302310 lncRNA downstream 373744 26071089 ~ 26073942 (-) True G223363
TU302295 lncRNA downstream 411885 26035415 ~ 26035801 (-) True G223354
TU302281 lncRNA downstream 424191 26022960 ~ 26023495 (-) True G223347
TU302429 lncRNA upstream 13567 26461326 ~ 26463045 (-) True G223455
TU302417 lncRNA upstream 15534 26463293 ~ 26464216 (-) True G223449
TU302420 lncRNA upstream 15534 26463293 ~ 26494229 (-) False G223449
TU302400 lncRNA upstream 20663 26468422 ~ 26470795 (-) True G223436
TU302401 lncRNA upstream 20663 26468422 ~ 26470795 (-) False G223436
XM_039790717.1 mRNA downstream 71924 26352631 ~ 26375762 (-) True riok3
XM_039790716.1 mRNA downstream 101953 26323493 ~ 26345733 (-) True rmc1
XM_039790127.1 mRNA downstream 299663 26110407 ~ 26148023 (-) True si:ch211-230g15.5
XM_039790721.1 mRNA upstream 36170 26483929 ~ 26502727 (-) False LOC120552560
XM_039790720.1 mRNA upstream 36170 26483929 ~ 26502727 (-) False LOC120552560
XM_039790719.1 mRNA upstream 36170 26483929 ~ 26502727 (-) False LOC120552560
XM_039790961.1 mRNA upstream 111676 26559435 ~ 26906332 (-) True LOC120552733
XM_039790722.1 mRNA upstream 497691 26945450 ~ 26968414 (-) True ssr1
TU302395 other downstream 38329 26404001 ~ 26409357 (-) True G223433
TU302346 other downstream 229362 26216885 ~ 26218324 (-) True G223395
TU302289 other downstream 317564 26059997 ~ 26130122 (-) True G223350
TU302290 other downstream 388624 26054519 ~ 26059062 (-) True G223351
TU302256 other downstream 404822 26041843 ~ 26042864 (-) False G223328
unassigned_transcript_1420 other upstream 2084 26449843 ~ 26449916 (-) True trnai-aau_31
unassigned_transcript_1421 other upstream 18678 26466437 ~ 26466510 (-) True trnai-aau_32
unassigned_transcript_1422 other upstream 19388 26467147 ~ 26467220 (-) True trnai-aau_33
unassigned_transcript_1423 other upstream 20000 26467759 ~ 26467832 (-) True trnai-aau_34
TU302399 other upstream 23945 26471704 ~ 26475911 (-) True G223435