RNA id: TCONS_00007094


Basic Information

Item Value
RNA id TCONS_00007094
length 116
RNA type rRNA
GC content 0.54
exon number 1
gene id XLOC_003640
representative True

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 38588451 ~ 38588566 (+)
genome version GRCz11_2017_zebrafish_Genome
species zebrafish
(Danio rerio)

Sequence

GTCACAGCCGTATCACCCTGCAGCCAAAGACCggctactcactgaagctaagcagggctgagcctggtcagtacctgcattggagaccacatgggaacactaggttgctgttgaaa

Function

GO: NA

KEGG: NA

Ensembl:

ensembl_id ENSDART00000182563

JBrowse2

Neighbor

RNA id RNA type direction distance location representative gene id
TCONS_00008656 lncRNA upstream 423697 38149888 ~ 38164754 (+) True XLOC_003637
TCONS_00008655 lncRNA upstream 587839 37995066 ~ 38000612 (+) True XLOC_003636
TCONS_00008654 lncRNA upstream 739740 37841257 ~ 37848711 (+) False XLOC_003634
TCONS_00008653 lncRNA upstream 739740 37841257 ~ 37848711 (+) True XLOC_003634
TCONS_00007073 lncRNA upstream 954421 37631714 ~ 37634030 (+) False XLOC_003629
TCONS_00008657 lncRNA downstream 15168 38603734 ~ 38614820 (+) False XLOC_003641
TCONS_00007095 lncRNA downstream 25910 38614476 ~ 38876352 (+) False XLOC_003641
TCONS_00007096 lncRNA downstream 25969 38614535 ~ 38614785 (+) True XLOC_003641
TCONS_00008658 lncRNA downstream 299316 38887882 ~ 38907795 (+) True XLOC_003643
TCONS_00008660 lncRNA downstream 311135 38899701 ~ 38948609 (+) False XLOC_003644
TCONS_00007093 mRNA upstream 130045 38429319 ~ 38458406 (+) True XLOC_003639
TCONS_00007091 mRNA upstream 167632 38280454 ~ 38420819 (+) False XLOC_003638
TCONS_00007092 mRNA upstream 167632 38332419 ~ 38420819 (+) True XLOC_003638
TCONS_00007089 mRNA upstream 664564 37905630 ~ 37923887 (+) False XLOC_003635
TCONS_00007090 mRNA upstream 667867 37909654 ~ 37920584 (+) True XLOC_003635
TCONS_00007099 mRNA downstream 516453 39105019 ~ 39112255 (+) False XLOC_003648
TCONS_00007100 mRNA downstream 518565 39107131 ~ 39112251 (+) True XLOC_003648
TCONS_00007101 mRNA downstream 531740 39120306 ~ 39148199 (+) False XLOC_003649
TCONS_00007102 mRNA downstream 531766 39120332 ~ 39142081 (+) False XLOC_003649
TCONS_00007103 mRNA downstream 546484 39135050 ~ 39148198 (+) False XLOC_003649
TCONS_00007079 other upstream 937487 37638982 ~ 37650964 (+) False XLOC_003630
TCONS_00007082 other upstream 938423 37647553 ~ 37650028 (+) True XLOC_003630
TCONS_00007077 other upstream 939348 37638980 ~ 37649103 (+) False XLOC_003630
TCONS_00007081 other upstream 943886 37639239 ~ 37644565 (+) False XLOC_003630
TCONS_00007069 other upstream 1223891 37364446 ~ 37364560 (+) True XLOC_003628
TCONS_00007097 other downstream 215045 38803611 ~ 38803738 (+) True XLOC_003642
TCONS_00007127 other downstream 2060905 40649471 ~ 40655871 (+) False XLOC_003667
TCONS_00007131 other downstream 2300614 40889180 ~ 40889294 (+) True XLOC_003670
TCONS_00007137 other downstream 2522103 41110669 ~ 41157928 (+) False XLOC_003675
TCONS_00007139 other downstream 2547043 41135609 ~ 41157926 (+) True XLOC_003675